RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 CCL22O00626 93 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 MAN2B1O00754 1011 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 BNIP3LO60238 219 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CTSLP07711 333 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 COL6A2P12110 1019 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 HLA-EP13747 358 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 TIMP2P16035 220 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 ZNF30P17039 623 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CRABP2P29373 138 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 SUOXP51687 545 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 STC1P52823 247 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 TMPRSS15P98073 1019 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 GRSF1Q12849 480 aaKnown RBP eCLIP12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 PEX6Q13608 980 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 PTPRRQ15256 657 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 ZKSCAN8Q15776 578 aaPredicted RBP12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 SMAD1Q15797 465 aaKnown RBP12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 FASTKD1Q53R41 847 aaKnown RBP12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 ZDHHC20Q5W0Z9 365 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CNSTQ6PJW8 725 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 SERPINA13PQ6UXR4 307 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 RGS9BPQ6ZS82 235 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CDHR3Q6ZTQ4 885 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CLEC14AQ86T13 490 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 RAVER1Q8IY67 606 aaKnown RBP12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 DTX3LQ8TDB6 740 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 MAGEB18Q96M61 343 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 ARHGEF3Q9NR81 526 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CACNA2D2Q9NY47 1150 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 FKBPLQ9UIM3 349 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 APPL1Q9UKG1 709 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 PPM1HQ9ULR3 514 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 STON1Q9Y6Q2 735 aa12.8□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 FAM95CA0A1B0GW59 222 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 GMNCA6NCL1 334 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 OR51F1A6NGY5 319 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 NPIPB15A6NHN6 443 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 PFDN6O15212 129 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 GLRA3O75311 464 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CLDN7O95471 211 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 C2P06681 752 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CYP2A6P11509 494 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CD72P21854 359 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 ADARP55265 1226 aaKnown RBP12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 STARD6P59095 220 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CACNG1Q06432 222 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 ELAVL3Q14576 367 aaKnown RBP12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 USP10Q14694 798 aaKnown RBP12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 ZNF789Q5FWF6 425 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 AARS2Q5JTZ9 985 aaKnown RBP12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 RNF187Q5TA31 235 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 HHATQ5VTY9 493 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 TTC19Q6DKK2 380 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CERS6Q6ZMG9 384 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 UBALD2Q8IYN6 164 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 GJD3Q8N144 294 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 PAF1Q8N7H5 531 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 ZNF513Q8N8E2 541 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 IL17RCQ8NAC3 791 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 OR8D1Q8WZ84 308 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 ZNF317Q96PQ6 595 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 FAM129BQ96TA1 746 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 GABRG3Q99928 467 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 FBXO6Q9NRD1 293 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 SLC39A10Q9ULF5 831 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CA14Q9ULX7 337 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 VWA7Q9Y334 891 aa12.79□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 A0A096LPK6 155 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 TRBV5-4A0A0C4DH59 114 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 AGAP14A8MT82 685 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 UPK3BL1B0FP48 263 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 UPK3BL2E5RIL1 263 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CD9P21926 228 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 MC4RP32245 332 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 TIE1P35590 1138 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 TTPAP49638 278 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 NUBP1P53384 320 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 SEC13P55735 322 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 RAB10P61026 200 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 MRPS21P82921 87 aaKnown RBP12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 PTSQ03393 145 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CAMK2GQ13555 558 aaPredicted RBP12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 SEMA3AQ14563 771 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 LRRC14Q15048 493 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 SEPT7Q16181 437 aaKnown RBP12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 DBN1Q16643 649 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 FBXO43Q4G163 708 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 LVRNQ6Q4G3 990 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 ZNF852Q6ZMS4 543 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CHPFQ8IZ52 775 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 ACVR1CQ8NER5 493 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 GRIN3AQ8TCU5 1115 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 MGARPQ8TDB4 240 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 DYDC1Q8WWB3 177 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 TSPAN17Q96FV3 270 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 OMDQ99983 421 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 SLC13A1Q9BZW2 595 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 IQCGQ9H095 443 aaKnown RBP12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 CD248Q9HCU0 757 aa12.78□□□□□ -0.36
SHANK2-AS3-201ENST00000307548 PRSS16Q9NQE7 514 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms