RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 NFATC2Q13469 925 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 NR6A1Q15406 480 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 C2CD6Q53TS8 623 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.77□□□□□ -0.53
SMIM4-201ENST00000307106 PAPD7Q5XG87 772 aaKnown RBP11.77□□□□□ -0.53
SMIM4-201ENST00000307106 TTI2Q6NXR4 508 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 DOK6Q6PKX4 331 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 RASGRP3Q8IV61 690 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 SFRP1Q8N474 314 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 EMC1Q8N766 993 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 RTL3Q8N8U3 475 aaKnown RBP11.77□□□□□ -0.53
SMIM4-201ENST00000307106 ECHDC3Q96DC8 303 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 COQ10AQ96MF6 247 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 OR2M4Q96R27 311 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 PDCL3Q9H2J4 239 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 ACSS2Q9NR19 701 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 GOLGA6AQ9NYA3 693 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 APEX2Q9UBZ4 518 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 RASA4BC9J798 803 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 RASA4O43374 803 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 KRT86O43790 486 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 EML2O95834 649 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 ANKRD34CP0C6C1 535 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 CD44P16070 742 aaKnown RBP11.76□□□□□ -0.53
SMIM4-201ENST00000307106 SLC9A1P19634 815 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 CDH5P33151 784 aaPredicted RBP11.76□□□□□ -0.53
SMIM4-201ENST00000307106 CLCN1P35523 988 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 GARSP41250 739 aaKnown RBP11.76□□□□□ -0.53
SMIM4-201ENST00000307106 RGRP47804 291 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 CCL11P51671 97 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 POLR2LP62875 67 aaKnown RBP11.76□□□□□ -0.53
SMIM4-201ENST00000307106 CHRNA6Q15825 494 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 C15orf59Q2T9L4 293 aaPredicted RBP11.76□□□□□ -0.53
SMIM4-201ENST00000307106 PARP15Q460N3 678 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 ZRANB3Q5FWF4 1079 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 RAET1GQ6H3X3 334 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 KLHL10Q6JEL2 608 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 SRLQ86TD4 932 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 CT55Q8WUE5 264 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 THAP4Q8WY91 577 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 SEC14L1Q92503 715 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 SMARCE1Q969G3 411 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 MFRPQ9BY79 579 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 ACTL8Q9H568 366 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 STN1Q9H668 368 aaKnown RBP11.76□□□□□ -0.53
SMIM4-201ENST00000307106 METTL5Q9NRN9 209 aaKnown RBP11.76□□□□□ -0.53
SMIM4-201ENST00000307106 B4GALT6Q9UBX8 382 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 LNPEPQ9UIQ6 1025 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 PADI1Q9ULC6 663 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 ZNF451Q9Y4E5 1061 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 SVILO95425 2214 aa11.76□□□□□ -0.53
SMIM4-201ENST00000307106 ARGFXA6NJG6 315 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 DPM1O60762 260 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 SMC2O95347 1197 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 CBX6O95503 412 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 GNA14O95837 355 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 PNMA6AP0CW24 399 aaPredicted RBP11.75□□□□□ -0.53
SMIM4-201ENST00000307106 NFKBIAP25963 317 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 EPHB2P29323 1055 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 NDST2P52849 883 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 EPHA4P54764 986 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 BCL2L1Q07817 233 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 IL11RAQ14626 422 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 CNGA3Q16281 694 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 UGT8Q16880 541 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 KRTAP21-3Q3LHN1 58 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 DENND2CQ68D51 928 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 SLC6A19Q695T7 634 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 ISM2Q6H9L7 571 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 ARCQ7LC44 396 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 PLXDC1Q8IUK5 500 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 CCDC185Q8N715 623 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 TSEN2Q8NCE0 465 aaKnown RBP11.75□□□□□ -0.53
SMIM4-201ENST00000307106 SH3KBP1Q96B97 665 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 C19orf60Q96EN9 201 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 DTD2Q96FN9 168 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 SCARF2Q96GP6 870 aaPredicted RBP11.75□□□□□ -0.53
SMIM4-201ENST00000307106 ELMO2Q96JJ3 720 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 OR6C1Q96RD1 312 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 UNKQ9C0B0 810 aaKnown RBP11.75□□□□□ -0.53
SMIM4-201ENST00000307106 ING2Q9H160 280 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 PDFQ9HBH1 243 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 SARS2Q9NP81 518 aaKnown RBP11.75□□□□□ -0.53
SMIM4-201ENST00000307106 LHX9Q9NQ69 397 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 KCTD5Q9NXV2 234 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 PCDHGB7Q9Y5F8 929 aa11.75□□□□□ -0.53
SMIM4-201ENST00000307106 MN1Q10571 1320 aaPredicted RBP11.75□□□□□ -0.53
SMIM4-201ENST00000307106 POLEQ07864 2286 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 GOLGA6L3A6NEY3 463 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 C21orf140B9A014 251 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 J3KR12 359 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 MT-ND3P03897 115 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 HSP90AA1P07900 732 aaKnown RBP11.74□□□□□ -0.53
SMIM4-201ENST00000307106 SDC4P31431 198 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 ETV3P41162 512 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 PPP1R2P41236 205 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 CSNK1DP48730 415 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 GFERP55789 205 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 SH3BP2P78314 561 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 CCDC14Q49A88 953 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms