RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ALFQ53S48 1182 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 IRGCQ6NXR0 463 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 SIX5Q8N196 739 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 OR52K2Q8NGK3 314 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 SELENOMQ8WWX9 145 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 MAGED4Q96JG8 741 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 RIOK2Q9BVS4 552 aaKnown RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 GPR174Q9BXC1 333 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 HSD3B7Q9H2F3 369 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 RETREG1Q9H6L5 497 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 SEMA4BQ9NPR2 832 aaPredicted RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 HSFX1Q9UBD0 423 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 A0A0D9SEW6 157 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 LILRB3O75022 631 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 FKBP9O95302 570 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 ZNF30P17039 623 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 PBX2P40425 430 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 AMZ1Q400G9 498 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 TSTD2Q5T7W7 516 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 CAPN13Q6MZZ7 669 aaPredicted RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 FKBP9P1Q75LS8 142 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 LPCAT2Q7L5N7 544 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 ZBTB2Q8N680 514 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 LRRC57Q8N9N7 239 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 HNRNPLLQ8WVV9 542 aaKnown RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 TCEAL4Q96EI5 215 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 TACO1Q9BSH4 297 aaKnown RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 MRPL46Q9H2W6 279 aaKnown RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 UBE2ZQ9H832 354 aaPredicted RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 ENTPD4Q9Y227 616 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 MTO1Q9Y2Z2 717 aaKnown RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 B4DGG1 531 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 H0Y858 1186 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 CCL22O00626 93 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 CASQ2O14958 399 aaPredicted RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 CPSF4O95639 269 aaKnown RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 MT-CO1P00395 513 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 ENO1P06733 434 aaKnown RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 ALPIP09923 528 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 NSG1P42857 185 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 SERINC3Q13530 473 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 AASDHQ4L235 1098 aaPredicted RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 XKR6Q5GH73 641 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 PIK3R6Q5UE93 754 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 ERN2Q76MJ5 926 aaKnown RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 PARGQ86W56 976 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 PTGR2Q8N8N7 351 aaPredicted RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 TPSD1Q9BZJ3 242 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 LINC00597Q9H2U6 94 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 IL1RL2Q9HB29 575 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 TNS1Q9HBL0 1735 aaKnown RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 NOD2Q9HC29 1040 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 POLR3BQ9NW08 1133 aaPredicted RBP9.24□□□□□ -0.93
PTPRE-202ENST00000306042 SNX6Q9UNH7 406 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 ARL2BPQ9Y2Y0 163 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 HEBP2Q9Y5Z4 205 aa9.24□□□□□ -0.93
PTPRE-202ENST00000306042 A0A1W2PP55 124 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 C16orf96A6NNT2 1141 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 SGTAO43765 313 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 EDIL3O43854 480 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 PRAMEF11O60813 436 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 ZNF217O75362 1048 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 ACP5P13686 325 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 OXTRP30559 389 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 ACTN3Q08043 901 aaPredicted RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 EFCAB3Q8N7B9 438 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 MAFAQ8NHW3 353 aaPredicted RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 FOXJ1Q92949 421 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 CLP1Q92989 425 aaKnown RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 APOPT1Q96IL0 206 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 ZSCAN5AQ9BUG6 496 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 THUMPD3Q9BV44 507 aaKnown RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 GSDMCQ9BYG8 508 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 RABGEF1Q9UJ41 708 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 USH1CQ9Y6N9 552 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 POLR2AP24928 1970 aaKnown RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 PRR5-ARHGAP8B1AHC4 643 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 ASGR2P07307 311 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 STK19P49842 368 aaPredicted RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 DRG2P55039 364 aaKnown RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 SPIDRQ14159 915 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 TEDDM1Q5T9Z0 273 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 TEX9Q8N6V9 391 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 CEP70Q8NHQ1 597 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 DDX1Q92499 740 aaKnown RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 LRIG1Q96JA1 1093 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 TRPC4Q9UBN4 977 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 RREB1Q92766 1687 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 FAM237BA0A1B0GVD1 139 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 TCRBV7S2A1N4TA0A589 114 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 PIPSLA2A3N6 862 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 WDR47O94967 919 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 SRPRAP08240 638 aaKnown RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 ALDH4A1P30038 563 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 IRS1P35568 1242 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 CXCL12P48061 93 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 SRSF11Q05519 484 aaKnown RBP9.23□□□□□ -0.93
PTPRE-202ENST00000306042 FOXM1Q08050 763 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 PRKG2Q13237 762 aa9.23□□□□□ -0.93
PTPRE-202ENST00000306042 TDGQ13569 410 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms