RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 TNKS2Q9H2K2 1166 aa10.57□□□□□ -0.72
CLP1-201ENST00000302731 SUV39H2Q9H5I1 410 aa10.57□□□□□ -0.72
CLP1-201ENST00000302731 TLE6Q9H808 572 aa10.57□□□□□ -0.72
CLP1-201ENST00000302731 ARHGEF3Q9NR81 526 aa10.57□□□□□ -0.72
CLP1-201ENST00000302731 DZANK1Q9NVP4 752 aa10.57□□□□□ -0.72
CLP1-201ENST00000302731 MARCOQ9UEW3 520 aaPredicted RBP10.57□□□□□ -0.72
CLP1-201ENST00000302731 LNPEPQ9UIQ6 1025 aa10.57□□□□□ -0.72
CLP1-201ENST00000302731 APPL1Q9UKG1 709 aa10.57□□□□□ -0.72
CLP1-201ENST00000302731 APOBEC2Q9Y235 224 aaKnown RBP10.57□□□□□ -0.72
CLP1-201ENST00000302731 SLC30A1Q9Y6M5 507 aa10.57□□□□□ -0.72
CLP1-201ENST00000302731 GOLGA8CPA6NN73 597 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 FCHO1O14526 889 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 ZNF195O14628 629 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 HOXC11O43248 304 aaPredicted RBP10.56□□□□□ -0.72
CLP1-201ENST00000302731 SRP72O76094 671 aaKnown RBP10.56□□□□□ -0.72
CLP1-201ENST00000302731 IPO13O94829 963 aaKnown RBP10.56□□□□□ -0.72
CLP1-201ENST00000302731 ESR1P03372 595 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 ASLP04424 464 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 T-ENOLP0DO92 83 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 PKMP14618 531 aaKnown RBP10.56□□□□□ -0.72
CLP1-201ENST00000302731 CD1DP15813 335 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 POLR2EP19388 210 aaKnown RBP10.56□□□□□ -0.72
CLP1-201ENST00000302731 TFEBP19484 476 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 RPS3P23396 243 aaKnown RBP eCLIP10.56□□□□□ -0.72
CLP1-201ENST00000302731 HNF1BP35680 557 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 NNMTP40261 264 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 STK19P49842 368 aaPredicted RBP10.56□□□□□ -0.72
CLP1-201ENST00000302731 CCNHP51946 323 aaPredicted RBP10.56□□□□□ -0.72
CLP1-201ENST00000302731 NAGLUP54802 743 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 ATP6V0D1P61421 351 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 NFKB2Q00653 900 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 PDAP1Q13442 181 aaKnown RBP10.56□□□□□ -0.72
CLP1-201ENST00000302731 DHCR24Q15392 516 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 ZRANB3Q5FWF4 1079 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 LYPLAL1Q5VWZ2 237 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 PSAPL1Q6NUJ1 521 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 ATG14Q6ZNE5 492 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 TPRG1Q6ZUI0 275 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 USP45Q70EL2 814 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 ADGRD2Q7Z7M1 963 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 RBM23Q86U06 439 aaKnown RBP10.56□□□□□ -0.72
CLP1-201ENST00000302731 PIANPQ8IYJ0 282 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 RYBPQ8N488 228 aaPredicted RBP10.56□□□□□ -0.72
CLP1-201ENST00000302731 OR6K2Q8NGY2 324 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 ITFG1Q8TB96 612 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 KCNJ9Q92806 393 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 EID2BQ96D98 161 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 SCRN2Q96FV2 425 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 BIRC8Q96P09 236 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 TMEM237Q96Q45 408 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 SMIM14Q96QK8 99 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 TRMOQ9BU70 441 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 DERL2Q9GZP9 239 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 LRMDAQ9H2I8 198 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 RASSF4Q9H2L5 321 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 TFB2MQ9H5Q4 396 aaKnown RBP10.56□□□□□ -0.72
CLP1-201ENST00000302731 OBP2AQ9NY56 170 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 VTI1BQ9UEU0 232 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 SLC8A2Q9UPR5 921 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 YBX2Q9Y2T7 364 aaKnown RBP10.56□□□□□ -0.72
CLP1-201ENST00000302731 MED16Q9Y2X0 877 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 PCDHB1Q9Y5F3 818 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 WNT6Q9Y6F9 365 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 OAS3Q9Y6K5 1087 aaKnown RBP10.56□□□□□ -0.72
CLP1-201ENST00000302731 GBF1Q92538 1859 aa10.56□□□□□ -0.72
CLP1-201ENST00000302731 MKI67P46013 3256 aaKnown RBP10.56□□□□□ -0.72
CLP1-201ENST00000302731 TRBV5-4A0A0C4DH59 114 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 C1orf232A0A0U1RR37 186 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 UBA6A0AVT1 1052 aaPredicted RBP10.55□□□□□ -0.72
CLP1-201ENST00000302731 A8MT66 165 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 HGSO14964 777 aaPredicted RBP10.55□□□□□ -0.72
CLP1-201ENST00000302731 VPS26AO75436 327 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 RASSF9O75901 435 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 RHOBTB1O94844 696 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 ADH1CP00326 375 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 SLC4A1P02730 911 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 SRPRAP08240 638 aaKnown RBP10.55□□□□□ -0.72
CLP1-201ENST00000302731 ALPIP09923 528 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 CTPS1P17812 591 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 MAGEA10P43363 369 aaPredicted RBP10.55□□□□□ -0.72
CLP1-201ENST00000302731 RECQLP46063 649 aaPredicted RBP10.55□□□□□ -0.72
CLP1-201ENST00000302731 RPL14P50914 215 aaKnown RBP10.55□□□□□ -0.72
CLP1-201ENST00000302731 NAA20P61599 178 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 POLR2LP62875 67 aaKnown RBP10.55□□□□□ -0.72
CLP1-201ENST00000302731 TUBB3Q13509 450 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 CBX2Q14781 532 aaPredicted RBP10.55□□□□□ -0.72
CLP1-201ENST00000302731 PTPRNQ16849 979 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 GPR33Q49SQ1 333 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 ARL13AQ5H913 290 aaPredicted RBP10.55□□□□□ -0.72
CLP1-201ENST00000302731 METTL21CQ5VZV1 264 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 ZDHHC20Q5W0Z9 365 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 GRAMD4Q6IC98 578 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 UGT3A1Q6NUS8 523 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 BRAT1Q6PJG6 821 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 SNX20Q7Z614 316 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 SPATA6LQ8N4H0 392 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 NKAPQ8N5F7 415 aaKnown RBP10.55□□□□□ -0.72
CLP1-201ENST00000302731 ZNF781Q8N8C0 355 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 PNPLA1Q8N8W4 532 aa10.55□□□□□ -0.72
CLP1-201ENST00000302731 TXNDC5Q8NBS9 432 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms