RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 LARS2Q15031 903 aaKnown RBP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 GFOD2Q3B7J2 385 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 RFTN2Q52LD8 501 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 FAM124AQ86V42 546 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 C10orf107Q8IVU9 208 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 SRFBP1Q8NEF9 429 aaKnown RBP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 ETNPPLQ8TBG4 499 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 SUN5Q8TC36 379 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 TBATAQ96M53 351 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 SEMA6BQ9H3T3 888 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 SMURF2Q9HAU4 748 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 PRDM16Q9HAZ2 1276 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 GBA2Q9HCG7 927 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 C2orf71A6NGG8 1288 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 SCAMP3O14828 347 aaKnown RBP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 PPEF2O14830 753 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 TLR1Q15399 786 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 ZNF548Q8NEK5 533 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 CKAP2Q8WWK9 683 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 COQ8BQ96D53 544 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 MGME1Q9BQP7 344 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 CCDC28BQ9BUN5 200 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 PDGFDQ9GZP0 370 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 MOCS1Q9NZB8 636 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 NUP50Q9UKX7 468 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 TELO2Q9Y4R8 837 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 E5RJQ4 531 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 H3BQF6 201 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 IDO1P14902 403 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 HDCP19113 662 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 PPM1AP35813 382 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 SREBF1P36956 1147 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 GJA8P48165 433 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 SEPHS1P49903 392 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 EIF5AP63241 154 aaKnown RBP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 CRADDP78560 199 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 RASGEF1BQ0VAM2 473 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 ST3GAL1Q11201 340 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 FSCN1Q16658 493 aaKnown RBP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 CPTPQ5TA50 214 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 AGBL3Q8NEM8 1001 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 AKAP1Q92667 903 aaKnown RBP eCLIP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 CERS2Q96G23 380 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 MRPL57Q9BQC6 102 aaKnown RBP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 CORO1BQ9BR76 489 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 COMMD4Q9H0A8 199 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 AGO4Q9HCK5 861 aaKnown RBP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 EGFL7Q9UHF1 273 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 U3KQV3 271 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 A0A0A0MRY4 1105 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 SLC25A14O95258 325 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 PSMA1P25786 263 aaKnown RBP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 BACE1P56817 501 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 RAB10P61026 200 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 TXNL4AP83876 142 aaKnown RBP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 FOLH1Q04609 750 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 TMEM86AQ8N2M4 240 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 KCTD4Q8WVF5 259 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 KAT2AQ92830 837 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 WNT8BQ93098 351 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 SPATA13Q96N96 652 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 KLHL5Q96PQ7 755 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 MAGEL2Q9UJ55 1249 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 HBS1LQ9Y450 684 aaKnown RBP10.37□□□□□ -0.75
CLIP1-201ENST00000302528 CD163L1Q9NR16 1453 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 PRAMEF33A0A0G2JMD5 474 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 LACTBL1A8MY62 500 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 SLC30A4O14863 429 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 AZIN1O14977 448 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 CHADO15335 359 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 PRAMEF10O60809 474 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 FSHRP23945 695 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 CYP2C18P33260 490 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 PTDSS1P48651 473 aaKnown RBP10.36□□□□□ -0.75
CLIP1-201ENST00000302528 ZNF132P52740 706 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 SLC12A3P55017 1021 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 CDH8P55286 799 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 CRY2Q49AN0 593 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 PDCD4Q53EL6 469 aaKnown RBP10.36□□□□□ -0.75
CLIP1-201ENST00000302528 PPP1R15BQ5SWA1 713 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 ZNF554Q86TJ5 538 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 TXNRD3Q86VQ6 643 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 ADCY4Q8NFM4 1077 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 GFM1Q96RP9 751 aaKnown RBP10.36□□□□□ -0.75
CLIP1-201ENST00000302528 LACRTQ9GZZ8 138 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 KCNQ2O43526 872 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 CD44P16070 742 aaKnown RBP10.36□□□□□ -0.75
CLIP1-201ENST00000302528 NELFEP18615 380 aaKnown RBP10.36□□□□□ -0.75
CLIP1-201ENST00000302528 KELP23276 732 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 IKBKEQ14164 716 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 NDUFA9Q16795 377 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 LY6KQ17RY6 165 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 VPS26BQ4G0F5 336 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 ZC3H12AQ5D1E8 599 aaKnown RBP10.36□□□□□ -0.75
CLIP1-201ENST00000302528 GALNT5Q7Z7M9 940 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 C17orf64Q86WR6 236 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 DENND1CQ8IV53 801 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 ACOT12Q8WYK0 555 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 BAP1Q92560 729 aa10.36□□□□□ -0.75
CLIP1-201ENST00000302528 RCN3Q96D15 328 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms