RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 NPIPB15A6NHN6 443 aaPredicted RBP15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 SOX1O00570 391 aaPredicted RBP15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 TBX10O75333 385 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 KCNA4P22459 653 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 FDXRP22570 491 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 SP100P23497 879 aaPredicted RBP15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 GRK2P25098 689 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 PTPN5P54829 565 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 XIAPP98170 497 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 KDSRQ06136 332 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 DLX2Q07687 328 aaPredicted RBP15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 BST1Q10588 318 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 GRM2Q14416 872 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 AGAP9Q5VTM2 703 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 LRRC8EQ6NSJ5 796 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 CGB2Q6NT52 195 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 PSAPL1Q6NUJ1 521 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 TAS2R42Q7RTR8 314 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 C10orf107Q8IVU9 208 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 STK40Q8N2I9 435 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 CBARPQ8N350 705 aaPredicted RBP15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 PNPLA1Q8N8W4 532 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 C7orf26Q96N11 449 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 AARSD1Q9BTE6 412 aaKnown RBP15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 BRD9Q9H8M2 597 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 KLHL14Q9P2G3 628 aa15.67■□□□□ 0.1
HERPUD1-201ENST00000300302 SZT2Q5T011 3432 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 A0A1W2PPC1 479 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 PRRT4C9JH25 899 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 LEFTY1O75610 366 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 SRP72O76094 671 aaKnown RBP15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 TGDSO95455 350 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 LTA4HP09960 611 aaKnown RBP15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 PRSS56P0CW18 603 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 MYL2P10916 166 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 IGFBP4P22692 258 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 PGGT1BP53609 377 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 CDKN2DP55273 166 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 SF3A3Q12874 501 aaKnown RBP eCLIP15.66■□□□□ 0.11e-8■■□□□ 12.2
HERPUD1-201ENST00000300302 CTC1Q2NKJ3 1217 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 FNDC3BQ53EP0 1204 aaKnown RBP15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 ZDHHC20Q5W0Z9 365 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 ZNF549Q6P9A3 640 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 CRTC1Q6UUV9 634 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 HCAR2Q8TDS4 363 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 UCMAQ8WVF2 138 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 NXPE3Q969Y0 559 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 NXNL1Q96CM4 212 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 KXD1Q9BQD3 176 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 THAP1Q9NVV9 213 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 COMMD10Q9Y6G5 202 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 WASF2Q9Y6W5 498 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 MYO9BQ13459 2157 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 REV3LO60673 3130 aa15.66■□□□□ 0.1
HERPUD1-201ENST00000300302 H2AFYO75367 372 aaKnown RBP15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 PRAMEF1O95521 474 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 SERPINE1P05121 402 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 RALBP11234 206 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 CYP2A6P11509 494 aaPredicted RBP15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 ITGALP20701 1170 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 SPAM1P38567 509 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 EIF2DP41214 584 aaKnown RBP15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 PTGER3P43115 390 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 GLRBP48167 497 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 CSHL1Q14406 222 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 ARSIQ5FYB1 569 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 LRRC66Q68CR7 880 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 FAM151BQ6UXP7 276 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 SNX20Q7Z614 316 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 PIANPQ8IYJ0 282 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 MICALL1Q8N3F8 863 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 FSTL5Q8N475 847 aaPredicted RBP15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 TERB1Q8NA31 727 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 UBXN10Q96LJ8 280 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 MRPL57Q9BQC6 102 aaKnown RBP15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 TRIM55Q9BYV6 548 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 PLA2G2FQ9BZM2 168 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 MRPL46Q9H2W6 279 aaKnown RBP15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 FAM96AQ9H5X1 160 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 TAS2R13Q9NYV9 303 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 CPSF2Q9P2I0 782 aaKnown RBP15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 GLYATL1P3A0A0U1RQE8 302 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 TBC1D3BA6NDS4 549 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 A8MX80 341 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 G3V2L1 256 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 DNAJC6O75061 913 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 ECI2O75521 394 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 KIAA0754O94854 1291 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 CCDC166P0CW27 439 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 FGF3P11487 239 aaPredicted RBP15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 BMP1P13497 986 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 FMO4P31512 558 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 GJA4P35212 333 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 CDKN1CP49918 316 aaPredicted RBP15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 SUOXP51687 545 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 PRKAA2P54646 552 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 ADARP55265 1226 aaKnown RBP15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 IFT88Q13099 833 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 PDAP1Q13442 181 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms