RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 LRRC73Q5JTD7 316 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 C6orf52Q5T4I8 152 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 KLC3Q6P597 504 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 C1orf50Q9BV19 199 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 CINPQ9BW66 212 aaPredicted RBP11.13□□□□□ -0.63
IDH3A-201ENST00000299518 MRM3Q9HC36 420 aaKnown RBP11.13□□□□□ -0.63
IDH3A-201ENST00000299518 KRT87PA6NCN2 255 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 ZNF840PA6NDX5 716 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 NR5A2O00482 541 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 SYN3O14994 580 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 FKBP6O75344 327 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 STC2O76061 302 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 CD160O95971 181 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 ARL1P40616 181 aaPredicted RBP11.13□□□□□ -0.63
IDH3A-201ENST00000299518 CDKL1Q00532 357 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 ACAP2Q15057 778 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 KIF19Q2TAC6 998 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 REP15Q6BDI9 236 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 VPS33AQ96AX1 596 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 MAELQ96JY0 434 aaKnown RBP11.13□□□□□ -0.63
IDH3A-201ENST00000299518 KLHL4Q9C0H6 718 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 SMG9Q9H0W8 520 aaKnown RBP11.13□□□□□ -0.63
IDH3A-201ENST00000299518 UBAP1Q9NZ09 502 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 SLAMF8Q9P0V8 285 aa11.13□□□□□ -0.63
IDH3A-201ENST00000299518 ARVCFO00192 962 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 AP3B1O00203 1094 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 TPST1O60507 370 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 PSMC3P17980 439 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 VCLP18206 1134 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 EEF1DP29692 281 aaKnown RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 PSME3P61289 254 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 NRG1Q02297 640 aaPredicted RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 CYTH1Q15438 398 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 NAIF1Q69YI7 327 aaPredicted RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 EP400NLQ6ZTU2 488 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 CARNMT1Q8N4J0 409 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 PTCD2Q8WV60 388 aaKnown RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 TRIB3Q96RU7 358 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 CACNA2D2Q9NY47 1150 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 SCOCQ9UIL1 159 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 MID2Q9UJV3 735 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 APPL1Q9UKG1 709 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 AGO1Q9UL18 857 aaKnown RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 V9GYQ6 96 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 TMEM189-UBE2V1I3L0A0 370 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 INPPL1O15357 1258 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 NPHS1O60500 1241 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 H2AFYO75367 372 aaKnown RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 SRP72O76094 671 aaKnown RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 WISP3O95389 354 aaPredicted RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 MT-ND1P03886 318 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 CASP2P42575 452 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 PIK3CGP48736 1102 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 MRPS35P82673 323 aaKnown RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 ARF5P84085 180 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 TRAF2Q12933 501 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 UGT3A2Q3SY77 523 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 ZRANB3Q5FWF4 1079 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 TXNDC8Q6A555 127 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 KIAA1841Q6NSI8 718 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 PQLC1Q8N2U9 271 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 CLDN19Q8N6F1 224 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 CALML6Q8TD86 181 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 EEF1AKMT1Q8WVE0 214 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 TADA1Q96BN2 335 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 CLSTN3Q9BQT9 956 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 EFCAB1Q9HAE3 211 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 ZNF225Q9UK10 706 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 PCDHB9Q9Y5E1 797 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 ZFC3H1O60293 1989 aaKnown RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 TBC1D4O60343 1298 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 CLASP2O75122 1294 aaKnown RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 RPP40O75818 363 aaKnown RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 C1RP00736 705 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 HMGA1P17096 107 aaKnown RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 IMPDH1P20839 514 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 FDXRP22570 491 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 STC1P52823 247 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 NKX3-2P78367 333 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 FOLH1Q04609 750 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 PARP15Q460N3 678 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 IFNEQ86WN2 208 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 CPSF7Q8N684 471 aaKnown RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 BRSK1Q8TDC3 778 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 DIS3LQ8TF46 1054 aaKnown RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 C19orf60Q96EN9 201 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 CAPNS2Q96L46 248 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 CNBD2Q96M20 576 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 UBA2Q9UBT2 640 aaPredicted RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 EVLQ9UI08 416 aaPredicted RBP11.12□□□□□ -0.63
IDH3A-201ENST00000299518 RAI2Q9Y5P3 530 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 A0A0C4DFX4 3053 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 CEP290O15078 2479 aa11.12□□□□□ -0.63
IDH3A-201ENST00000299518 FAM149AA5PLN7 773 aa11.11□□□□□ -0.63
IDH3A-201ENST00000299518 BTN3A1O00481 513 aa11.11□□□□□ -0.63
IDH3A-201ENST00000299518 SMAD6O43541 496 aaKnown RBP11.11□□□□□ -0.63
IDH3A-201ENST00000299518 MAGEA11P43364 429 aa11.11□□□□□ -0.63
IDH3A-201ENST00000299518 SLC7A2P52569 658 aa11.11□□□□□ -0.63
IDH3A-201ENST00000299518 OXCT1P55809 520 aa11.11□□□□□ -0.63
IDH3A-201ENST00000299518 SPOUT1Q5T280 376 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms