RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 SEMA3CQ99985 751 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 C11orf84Q9BUA3 381 aaPredicted RBP12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 CHID1Q9BWS9 393 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 VTA1Q9NP79 307 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 EXD2Q9NVH0 621 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 IFT80Q9P2H3 777 aaPredicted RBP12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 ZMYM5Q9UJ78 669 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 BPTFQ12830 3046 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 MYO1GB0I1T2 1018 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 MATN3O15232 486 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 HS6ST1O60243 411 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 SNAP91O60641 907 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 DEAF1O75398 565 aaPredicted RBP12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 FYNP06241 537 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 ITGB6P18564 788 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 CAPN3P20807 821 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 IMPDH1P20839 514 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 MAGEA12P43365 314 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 FOXA1P55317 472 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 MTPNP58546 118 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 PIGFQ07326 219 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 ZRANB3Q5FWF4 1079 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 OTUD1Q5VV17 481 aaPredicted RBP12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 KIAA0930Q6ICG6 404 aaPredicted RBP12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 PPP4R4Q6NUP7 873 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 ARMCX6Q7L4S7 300 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 MILR1Q7Z6M3 343 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 SFRP1Q8N474 314 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 GLMNQ92990 594 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 VPS28Q9UK41 221 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 GJD2Q9UKL4 321 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 RBMX2Q9Y388 322 aaKnown RBP12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 COL4A5P29400 1685 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 KANSL1LA0AUZ9 987 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 C16orf96A6NNT2 1141 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 J3KR12 359 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 GGT5P36269 586 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 GSSP48637 474 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 PIK3CGP48736 1102 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 ARSDP51689 593 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 APLP1P51693 650 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 AFF1P51825 1210 aaKnown RBP12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 SLC10A7Q0GE19 358 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 CARTPTQ16568 116 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 C9orf131Q5VYM1 1079 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 KCTD11Q693B1 232 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 GLYATQ6IB77 296 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 CARM1Q86X55 608 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 ZC3H7AQ8IWR0 971 aaKnown RBP12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 ARRDC4Q8NCT1 418 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 C2CD4AQ8NCU7 369 aaPredicted RBP12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 OSCP1Q8WVF1 389 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 PLEKHA8Q96JA3 519 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 HIPK3Q9H422 1215 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 HACD3Q9P035 362 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 MARCH4Q9P2E8 410 aaPredicted RBP12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 BAG5Q9UL15 447 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 PTPRFP10586 1907 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 TPD52L2O43399 206 aaKnown RBP12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 NOBOXO60393 691 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 GUCA1CO95843 209 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 CAPGP40121 348 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 CDKN2DP55273 166 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 SH3BP2P78314 561 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 BNIP2Q12982 314 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 RGS21Q2M5E4 152 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 MFSD4BQ5TF39 518 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 PAQR9Q6ZVX9 377 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 ZDHHC13Q8IUH4 622 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 OR13C4Q8NGS5 318 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 METTL6Q8TCB7 284 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 KCNN1Q92952 543 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 SLCO4A1Q96BD0 722 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 CDK15Q96Q40 435 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 ZBTB18Q99592 522 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 APOL5Q9BWW9 433 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 KLHL25Q9H0H3 589 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 RBM38Q9H0Z9 239 aaKnown RBP12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 AGO3Q9H9G7 860 aaKnown RBP12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 SLC38A7Q9NVC3 462 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 DNAJC15Q9Y5T4 150 aa12.55□□□□□ -0.4
TMEM200A-201ENST00000296978 CBFA2T3O75081 653 aa12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 SOAT2O75908 522 aa12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 S100BP04271 92 aaPredicted RBP12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 C8BP07358 591 aa12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 IL7RP16871 459 aa12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 CDH3P22223 829 aa12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 CDC42EP1Q00587 391 aa12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 IL5RAQ01344 420 aa12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 RAD51Q06609 339 aa12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 SPIDRQ14159 915 aa12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 TSNQ15631 228 aaKnown RBP12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 INTS6LQ5JSJ4 861 aaKnown RBP12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 DUS1LQ6P1R4 473 aaKnown RBP12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 ADCK1Q86TW2 530 aa12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 TRPV3Q8NET8 790 aa12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 TFAP2CQ92754 450 aa12.54□□□□□ -0.4
TMEM200A-201ENST00000296978 UPF1Q92900 1129 aaKnown RBP eCLIP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms