RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 MT-CYBP00156 380 aaPredicted RBP13.43□□□□□ -0.26
HPS3-201ENST00000296051 HTR1BP28222 390 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 GPR1P46091 355 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 BROXQ5VW32 411 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 PAOXQ6QHF9 649 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 IL27RAQ6UWB1 636 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 ZNF438Q7Z4V0 828 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 HJURPQ8NCD3 748 aaPredicted RBP13.43□□□□□ -0.26
HPS3-201ENST00000296051 MTFMTQ96DP5 389 aaKnown RBP13.43□□□□□ -0.26
HPS3-201ENST00000296051 DTLQ9NZJ0 730 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 TEKT2Q9UIF3 430 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 SNX10Q9Y5X0 201 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 C2CD4BA6NLJ0 364 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 MSI1O43347 362 aaKnown RBP13.42□□□□□ -0.26
HPS3-201ENST00000296051 ASNA1O43681 348 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 CCNT2O60583 730 aaKnown RBP13.42□□□□□ -0.26
HPS3-201ENST00000296051 CILPO75339 1184 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 ATG7O95352 703 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 NADKO95544 446 aaPredicted RBP13.42□□□□□ -0.26
HPS3-201ENST00000296051 GNA12Q03113 381 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 NAB1Q13506 487 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 TMEM214Q6NUQ4 689 aaKnown RBP13.42□□□□□ -0.26
HPS3-201ENST00000296051 CHST15Q7LFX5 561 aaPredicted RBP13.42□□□□□ -0.26
HPS3-201ENST00000296051 BORCS5Q969J3 196 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 RIPOR3Q96MK2 946 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 FIZ1Q96SL8 496 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 ELOVL6Q9H5J4 265 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 ZFP14Q9HCL3 533 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 SLIT2O94813 1529 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 LTBP3Q9NS15 1303 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 BCLAF3A2AJT9 711 aaKnown RBP13.42□□□□□ -0.26
HPS3-201ENST00000296051 ARL5CA6NH57 179 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 FFAR3O14843 346 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 GPR42O15529 346 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 SEC24AO95486 1093 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 ASLP04424 464 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 ALDH9A1P49189 494 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 SLC18A2Q05940 514 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 ATG14Q6ZNE5 492 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 TERB1Q8NA31 727 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 ZFAND2BQ8WV99 257 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 CANT1Q8WVQ1 401 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 DPY30Q9C005 99 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 ZYG11BQ9C0D3 744 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 RHOJQ9H4E5 214 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 SOHLH2Q9NX45 425 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 ZNHIT2Q9UHR6 403 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 RWDD3Q9Y3V2 267 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 INSL6Q9Y581 213 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 SNX8Q9Y5X2 465 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 TSPAN1O60635 241 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 H6PDO95479 791 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 PTPN3P26045 913 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 NMBRP28336 390 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 PRIM2P49643 509 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 ENTPD1P49961 510 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 HK2P52789 917 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 PRKAA2P54646 552 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 METTL21CQ5VZV1 264 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 CMASQ8NFW8 434 aaPredicted RBP13.42□□□□□ -0.26
HPS3-201ENST00000296051 B3GALT6Q96L58 329 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 SEMA3CQ99985 751 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 GPSM3Q9Y4H4 160 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 DYTNA2CJ06 578 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 F8W810 466 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 EDIL3O43854 480 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 EPHX1P07099 455 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 CYP4F2P78329 520 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 CYP4F3Q08477 520 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 MADCAM1Q13477 382 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 GCNT7Q6ZNI0 430 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 EID3Q8N140 333 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 HDAC10Q969S8 669 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 ESAMQ96AP7 390 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 FCRL2Q96LA5 508 aaPredicted RBP13.42□□□□□ -0.26
HPS3-201ENST00000296051 MRPL57Q9BQC6 102 aaKnown RBP13.42□□□□□ -0.26
HPS3-201ENST00000296051 MLPHQ9BV36 600 aaPredicted RBP13.42□□□□□ -0.26
HPS3-201ENST00000296051 OSBPL6Q9BZF3 934 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 TMPRSS4Q9NRS4 437 aa13.42□□□□□ -0.26
HPS3-201ENST00000296051 MAGEB3O15480 346 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 CD86P42081 329 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 IDH2P48735 452 aaKnown RBP13.41□□□□□ -0.26
HPS3-201ENST00000296051 LIMK2P53671 638 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 CACHD1Q5VU97 1274 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 FAM46CQ5VWP2 391 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 SCARA3Q6AZY7 606 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 TOP6BLQ8N6T0 577 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 C10orf53Q8N6V4 93 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 OR9I1Q8NGQ6 314 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 MTERF3Q96E29 417 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 TPD52L3Q96J77 140 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 MAGED4Q96JG8 741 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 EURLQ9NYK6 297 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 VPS51Q9UID3 782 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 PCDHB9Q9Y5E1 797 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 MGAT4DA6NG13 374 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 EIF2S1P05198 315 aaKnown RBP13.41□□□□□ -0.26
HPS3-201ENST00000296051 OR56A5P0C7T3 313 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 TPSB2P20231 275 aa13.41□□□□□ -0.26
HPS3-201ENST00000296051 ICAM3P32942 547 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms