RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 SYT10Q6XYQ8 523 aa26.81■■□□□ 1.88
SSU72-201ENST00000291386 DTX3LQ8TDB6 740 aa26.81■■□□□ 1.88
SSU72-201ENST00000291386 BLOC1S5Q8TDH9 187 aa26.81■■□□□ 1.88
SSU72-201ENST00000291386 GRK7Q8WTQ7 553 aa26.81■■□□□ 1.88
SSU72-201ENST00000291386 CAPZA3Q96KX2 299 aa26.81■■□□□ 1.88
SSU72-201ENST00000291386 RTKNQ9BST9 563 aa26.81■■□□□ 1.88
SSU72-201ENST00000291386 WDR26Q9H7D7 661 aa26.81■■□□□ 1.88
SSU72-201ENST00000291386 EIF2B3Q9NR50 452 aaKnown RBP26.81■■□□□ 1.88
SSU72-201ENST00000291386 DLL3Q9NYJ7 618 aa26.81■■□□□ 1.88
SSU72-201ENST00000291386 NEU2Q9Y3R4 380 aa26.81■■□□□ 1.88
SSU72-201ENST00000291386 OR1A2Q9Y585 309 aa26.81■■□□□ 1.88
SSU72-201ENST00000291386 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP26.8■■□□□ 1.88
SSU72-201ENST00000291386 CACNB4O00305 520 aaPredicted RBP26.8■■□□□ 1.88
SSU72-201ENST00000291386 CSF2P04141 144 aa26.8■■□□□ 1.88
SSU72-201ENST00000291386 CD59P13987 128 aa26.8■■□□□ 1.88
SSU72-201ENST00000291386 PAFAH1B1P43034 410 aa26.8■■□□□ 1.88
SSU72-201ENST00000291386 EIF2B5Q13144 721 aaKnown RBP26.8■■□□□ 1.88
SSU72-201ENST00000291386 SUZ12Q15022 739 aaKnown RBP26.8■■□□□ 1.88
SSU72-201ENST00000291386 UAP1L1Q3KQV9 507 aa26.8■■□□□ 1.88
SSU72-201ENST00000291386 PRAMEF14Q5SWL7 426 aa26.8■■□□□ 1.88
SSU72-201ENST00000291386 RAET1GQ6H3X3 334 aa26.8■■□□□ 1.88
SSU72-201ENST00000291386 ADAMTSL4Q6UY14 1074 aa26.8■■□□□ 1.88
SSU72-201ENST00000291386 GLT6D1Q7Z4J2 308 aa26.8■■□□□ 1.88
SSU72-201ENST00000291386 TAB3Q8N5C8 712 aaPredicted RBP26.8■■□□□ 1.88
SSU72-201ENST00000291386 BRSK1Q8TDC3 778 aa26.8■■□□□ 1.88
SSU72-201ENST00000291386 C19orf43Q9BQ61 176 aa26.8■■□□□ 1.88
SSU72-201ENST00000291386 RIOK2Q9BVS4 552 aaKnown RBP26.8■■□□□ 1.88
SSU72-201ENST00000291386 IL17CQ9P0M4 197 aa26.8■■□□□ 1.88
SSU72-201ENST00000291386 PDE2AO00408 941 aaPredicted RBP26.79■■□□□ 1.88
SSU72-201ENST00000291386 PPFIA2O75334 1257 aa26.79■■□□□ 1.88
SSU72-201ENST00000291386 MYCLP1P12525 358 aaPredicted RBP26.79■■□□□ 1.88
SSU72-201ENST00000291386 NME1P15531 152 aaKnown RBP26.79■■□□□ 1.88
SSU72-201ENST00000291386 KELP23276 732 aa26.79■■□□□ 1.88
SSU72-201ENST00000291386 EPHA8P29322 1005 aaPredicted RBP26.79■■□□□ 1.88
SSU72-201ENST00000291386 GPR1P46091 355 aa26.79■■□□□ 1.88
SSU72-201ENST00000291386 TAF1AQ15573 450 aaPredicted RBP26.79■■□□□ 1.88
SSU72-201ENST00000291386 ZDHHC20Q5W0Z9 365 aa26.79■■□□□ 1.88
SSU72-201ENST00000291386 GPR26Q8NDV2 337 aa26.79■■□□□ 1.88
SSU72-201ENST00000291386 SAP25Q8TEE9 199 aa26.79■■□□□ 1.88
SSU72-201ENST00000291386 SLCO2A1Q92959 643 aa26.79■■□□□ 1.88
SSU72-201ENST00000291386 PLEKHG4BQ96PX9 1271 aa26.79■■□□□ 1.88
SSU72-201ENST00000291386 PHPT1Q9NRX4 125 aaPredicted RBP26.79■■□□□ 1.88
SSU72-201ENST00000291386 E7EVH7 732 aa26.78■■□□□ 1.88
SSU72-201ENST00000291386 KRT14P02533 472 aa26.78■■□□□ 1.88
SSU72-201ENST00000291386 BPIP17213 487 aa26.78■■□□□ 1.88
SSU72-201ENST00000291386 CDK3Q00526 305 aa26.78■■□□□ 1.88
SSU72-201ENST00000291386 HEATR4Q86WZ0 1026 aa26.78■■□□□ 1.88
SSU72-201ENST00000291386 WDR92Q96MX6 357 aa26.78■■□□□ 1.88
SSU72-201ENST00000291386 AGAP2Q99490 1192 aa26.78■■□□□ 1.88
SSU72-201ENST00000291386 LGR4Q9BXB1 951 aa26.78■■□□□ 1.88
SSU72-201ENST00000291386 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP26.78■■□□□ 1.882e-7■■■■■ 36.7
SSU72-201ENST00000291386 PCYOX1Q9UHG3 505 aa26.78■■□□□ 1.88
SSU72-201ENST00000291386 LRP4O75096 1905 aa26.78■■□□□ 1.88
SSU72-201ENST00000291386 CCDC188H7C350 402 aa26.77■■□□□ 1.88
SSU72-201ENST00000291386 TNFRSF10CO14798 259 aa26.77■■□□□ 1.88
SSU72-201ENST00000291386 TUBB4AP04350 444 aa26.77■■□□□ 1.88
SSU72-201ENST00000291386 PDE1BQ01064 536 aa26.77■■□□□ 1.88
SSU72-201ENST00000291386 CDH17Q12864 832 aa26.77■■□□□ 1.88
SSU72-201ENST00000291386 PDPK2PQ6A1A2 396 aa26.77■■□□□ 1.88
SSU72-201ENST00000291386 KANSL1Q7Z3B3 1105 aa26.77■■□□□ 1.88
SSU72-201ENST00000291386 PIP4P1Q86T03 277 aa26.77■■□□□ 1.88
SSU72-201ENST00000291386 TRAM1L1Q8N609 369 aa26.77■■□□□ 1.88
SSU72-201ENST00000291386 TBATAQ96M53 351 aa26.77■■□□□ 1.88
SSU72-201ENST00000291386 ZSCAN5AQ9BUG6 496 aa26.77■■□□□ 1.88
SSU72-201ENST00000291386 PNMA8BQ9ULN7 279 aaPredicted RBP26.77■■□□□ 1.88
SSU72-201ENST00000291386 C2orf81A6NN90 581 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 CRTAMO95727 393 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 GAS8O95995 478 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 APRTP07741 180 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 LPOP22079 712 aaPredicted RBP26.76■■□□□ 1.87
SSU72-201ENST00000291386 LMAN1P49257 510 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 HNRNPKP61978 463 aaKnown RBP eCLIP26.76■■□□□ 1.87
SSU72-201ENST00000291386 BASP1P80723 227 aaKnown RBP26.76■■□□□ 1.87
SSU72-201ENST00000291386 BNIP3Q12983 259 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 ENPP7Q6UWV6 458 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 OR56A4Q8NGH8 313 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 BTN2A2Q8WVV5 523 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 COX14Q96I36 57 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 C16orf45Q96MC5 204 aaPredicted RBP26.76■■□□□ 1.87
SSU72-201ENST00000291386 RUNDC3BQ96NL0 473 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 DDX47Q9H0S4 455 aaKnown RBP26.76■■□□□ 1.87
SSU72-201ENST00000291386 CASS4Q9NQ75 786 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 DNAJC28Q9NX36 388 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 KLF15Q9UIH9 416 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 PKP3Q9Y446 797 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 ZNF106Q9H2Y7 1883 aaKnown RBP26.76■■□□□ 1.87
SSU72-201ENST00000291386 CFAP54Q96N23 3096 aa26.76■■□□□ 1.87
SSU72-201ENST00000291386 TDRD6O60522 2096 aaKnown RBP26.75■■□□□ 1.87
SSU72-201ENST00000291386 H3BM21 787 aa26.75■■□□□ 1.87
SSU72-201ENST00000291386 FLRT2O43155 660 aa26.75■■□□□ 1.87
SSU72-201ENST00000291386 PIAS2O75928 621 aa26.75■■□□□ 1.87
SSU72-201ENST00000291386 ECEL1O95672 775 aa26.75■■□□□ 1.87
SSU72-201ENST00000291386 SLC4A1P02730 911 aa26.75■■□□□ 1.87
SSU72-201ENST00000291386 TPSB2P20231 275 aa26.75■■□□□ 1.87
SSU72-201ENST00000291386 MAGEA6P43360 314 aa26.75■■□□□ 1.87
SSU72-201ENST00000291386 BLKP51451 505 aa26.75■■□□□ 1.87
SSU72-201ENST00000291386 CDK16Q00536 496 aa26.75■■□□□ 1.87
SSU72-201ENST00000291386 PPARDQ03181 441 aa26.75■■□□□ 1.87
SSU72-201ENST00000291386 TRIP13Q15645 432 aaPredicted RBP26.75■■□□□ 1.87
SSU72-201ENST00000291386 TPSAB1Q15661 275 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms