RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 TCAF1Q9Y4C2 921 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 HS3ST4Q9Y661 456 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 NINQ8N4C6 2090 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 CCDC162PA2VCL2 907 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 PDZK1P1A8MUH7 402 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 SLCO1B7G3V0H7 640 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 AZIN1O14977 448 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 EPORP19235 508 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 POLR2EP19388 210 aaKnown RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 MAGP20916 626 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 LPOP22079 712 aaPredicted RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 WARSP23381 471 aaKnown RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 PTPN9P43378 593 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 DGKEP52429 567 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 ALFQ53S48 1182 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 TMEM110Q86TL2 294 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 SYT12Q8IV01 421 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 FBXO27Q8NI29 283 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 TWIST2Q8WVJ9 160 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 PPP2R3CQ969Q6 453 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 MAP10Q9P2G4 905 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 CORO1CQ9ULV4 474 aaPredicted RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 H0Y858 1186 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 M0R3G1 203 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 GPR32O75388 356 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 LBPP18428 481 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 GSTT1P30711 240 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 GDF5P43026 501 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 SH3D19Q5HYK7 790 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 SIRPB2Q5JXA9 342 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 RAET1GQ6H3X3 334 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 RETSATQ6NUM9 610 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 FBXL19Q6PCT2 694 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 SPESP1Q6UW49 350 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 ARCQ7LC44 396 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 ZC3H7AQ8IWR0 971 aaKnown RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 ZNF276Q8N554 614 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 CLDN19Q8N6F1 224 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 NPWQ8N729 165 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 BTN2A3PQ96KV6 586 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 FAM126AQ9BYI3 521 aaPredicted RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 SPAG4Q9NPE6 437 aa4.78□□□□□ -1.64
UBR1-201ENST00000290650 CNOT6Q9ULM6 557 aaKnown RBP4.78□□□□□ -1.64
UBR1-201ENST00000290650 A0A1W2PRU2 124 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 PDLIM1O00151 329 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 TBX10O75333 385 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 IPO13O94829 963 aaKnown RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 OR4F21O95013 312 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 COX7A2P14406 83 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 ARSAP15289 507 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 ALOX15P16050 662 aaPredicted RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 CENPAP49450 140 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 ZNF132P52740 706 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 CCDC15Q0P6D6 951 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 C16orf72Q14CZ0 275 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 XKR6Q5GH73 641 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 ZC3H12BQ5HYM0 836 aaKnown RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 FGD3Q5JSP0 725 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 TXNDC8Q6A555 127 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 RNF19BQ6ZMZ0 732 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 GPRIN3Q6ZVF9 776 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 SMG8Q8ND04 991 aaKnown RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 SLC7A5P2Q9GIP4 190 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 OSER1Q9NX31 292 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 USE1Q9NZ43 259 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 DERAQ9Y315 318 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 PTCH2Q9Y6C5 1203 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 BIRC5O15392 142 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 SYN1P17600 705 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 CLCN5P51795 746 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 MTPNP58546 118 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 CBX2Q14781 532 aaPredicted RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 PRKD1Q15139 912 aaPredicted RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 REP15Q6BDI9 236 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 HEATR4Q86WZ0 1026 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 FAXDC2Q96IV6 333 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 TEKT5Q96M29 485 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 ZNF558Q96NG5 402 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 PAIP1Q9H074 479 aaKnown RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 S100A14Q9HCY8 104 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 TMLHEQ9NVH6 421 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 PDP2Q9P2J9 529 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 DOLKQ9UPQ8 538 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 AP4B1Q9Y6B7 739 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 MATN3O15232 486 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 EIF2S1P05198 315 aaKnown RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 SERPINA4P29622 427 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 AGTR2P50052 363 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 PTPRRQ15256 657 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 IRGCQ6NXR0 463 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 FBXL22Q6P050 247 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 PAQR3Q6TCH7 311 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 C15orf39Q6ZRI6 1047 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 SATL1Q86VE3 508 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 CAMK1DQ8IU85 385 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 WDR48Q8TAF3 677 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 LPGAT1Q92604 370 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 RMND5BQ96G75 393 aaPredicted RBP4.77□□□□□ -1.65
UBR1-201ENST00000290650 SMIM14Q96QK8 99 aa4.77□□□□□ -1.65
UBR1-201ENST00000290650 ACBD6Q9BR61 282 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms