RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 KLHDC10Q6PID8 442 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 STARD8Q92502 1023 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 DLG5Q8TDM6 1919 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 H0Y858 1186 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 ITPKAP23677 461 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 SLC26A9Q7LBE3 791 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 THAP5Q7Z6K1 395 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 LRRC49Q8IUZ0 686 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 UNC5BQ8IZJ1 945 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 NKD2Q969F2 451 aaPredicted RBP15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 KIFC1Q9BW19 673 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 ANGPT4Q9Y264 503 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 TBX10O75333 385 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 HLA-DQA2P01906 255 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 CYP2A6P11509 494 aaPredicted RBP15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 RPS9P46781 194 aaKnown RBP15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 CDK9P50750 372 aaKnown RBP15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 LGALS3BPQ08380 585 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 NPY5RQ15761 445 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 TXNDC11Q6PKC3 985 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 FAM35AQ86V20 835 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 GLOD4Q9HC38 313 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 STARD7Q9NQZ5 370 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 SMPD3Q9NY59 655 aaPredicted RBP15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 NFKBIL1Q9UBC1 381 aaPredicted RBP15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 CILPO75339 1184 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 RGS20O76081 388 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 NUDT14O95848 222 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 SERPINA4P29622 427 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 UGT2B15P54855 530 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 IQSEC1Q6DN90 963 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 OR52J3Q8NH60 311 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 DMRTB1Q96MA1 342 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 ZFYVE1Q9HBF4 777 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 SSR3Q9UNL2 185 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 AP3M1Q9Y2T2 418 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 A0A1W2PQH9 124 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 PSIP1O75475 530 aaKnown RBP15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 THRBP10828 461 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 EPHX2P34913 555 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 CA9Q16790 459 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 AHSA2Q719I0 299 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 GALNT15Q8N3T1 639 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 AGO3Q9H9G7 860 aaKnown RBP15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 CNOT6Q9ULM6 557 aaKnown RBP15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 ENTPD4Q9Y227 616 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 UBXN8O00124 270 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 PLIN3O60664 434 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 ATP5C1P36542 298 aaKnown RBP15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 YAP1P46937 504 aaKnown RBP15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 TGM3Q08188 693 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 TDRPQ86YL5 185 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 DEPDC4Q8N2C3 294 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 C2orf73Q8N5S3 287 aaPredicted RBP15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 GBA3Q9H227 469 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 DNAAF2Q9NVR5 837 aaKnown RBP15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 TMEM63AO94886 807 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 PRG2P13727 222 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 HOXB8P17481 243 aaPredicted RBP15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 BRCC3P46736 316 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 INTS11Q5TA45 600 aaKnown RBP15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 RIOX2Q8IUF8 465 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 SLITRK2Q9H156 845 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 RSPH9Q9H1X1 276 aaPredicted RBP15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 RIPK3Q9Y572 518 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 SLIT3O75094 1523 aa15.3■□□□□ 0.04
SHROOM4-201ENST00000289292 SUV39H1O43463 412 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 PSMD5Q16401 504 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 INSCQ1MX18 579 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 NDUFAF6Q330K2 333 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 FNDC3BQ53EP0 1204 aaKnown RBP15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 LRRC17Q8N6Y2 441 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 CLEC4CQ8WTT0 213 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 CXorf21Q9HAI6 301 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 TUBA8Q9NY65 449 aaPredicted RBP15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 ING4Q9UNL4 249 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 CXorf49A8MYA2 514 aaPredicted RBP15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 MT-CYBP00156 380 aaPredicted RBP15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 ZNF135P52742 658 aaPredicted RBP15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 TEX44Q53QW1 395 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 TMEM214Q6NUQ4 689 aaKnown RBP15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 SPATA19Q7Z5L4 167 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 FAM20CQ8IXL6 584 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 CCDC28BQ9BUN5 200 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 WRAP73Q9P2S5 460 aaPredicted RBP15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 IQCF5A8MTL0 148 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 FTH1P02794 183 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 LIMK2P53671 638 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 CDK18Q07002 472 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 ABHD15Q6UXT9 468 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 KRT74Q7RTS7 529 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 ZNF438Q7Z4V0 828 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 EBF2Q9HAK2 575 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 MFHAS1Q9Y4C4 1052 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 UGT2B11O75310 529 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 NR2F1P10589 423 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 MTHFD1P11586 935 aaKnown RBP15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 GAD2Q05329 585 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 CYP2A13Q16696 494 aa15.29■□□□□ 0.04
SHROOM4-201ENST00000289292 TMEM198Q66K66 360 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms