RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 SAT2Q96F10 170 aaPredicted RBP4.38□□□□□ -1.71
NCOA1-201ENST00000288599 CMTM3Q96MX0 182 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 LRFN5Q96NI6 719 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 HEPHQ9BQS7 1158 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 UBTD1Q9HAC8 227 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 DDX18Q9NVP1 670 aaKnown RBP4.38□□□□□ -1.71
NCOA1-201ENST00000288599 FTSJ1Q9UET6 329 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 CNTN6Q9UQ52 1028 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 FLT4P35916 1363 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 C1orf232A0A0U1RR37 186 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 A0A1B0GTH6 734 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 TTC26A0AVF1 554 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 E9PI62 339 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 SHOXO15266 292 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 GPAA1O43292 621 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 CCDC22O60826 627 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 ZMPSTE24O75844 475 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 NFATC1O95644 943 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 IGHEP01854 428 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 GNB3P16520 340 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 NR2F2P24468 414 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 HLA-DMAP28067 261 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 L1CAMP32004 1257 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 TSFMP43897 325 aaKnown RBP4.38□□□□□ -1.71
NCOA1-201ENST00000288599 GLRBP48167 497 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 RBP5P82980 135 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 TXNRD1Q16881 649 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 POM121L1PQ3SYA9 428 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 LYRM7Q5U5X0 104 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 CARD17Q5XLA6 110 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 ATG9BQ674R7 924 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 SLC44A5Q8NCS7 719 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 FAM89AQ96GI7 184 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 CCDC115Q96NT0 180 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 LXNQ9BS40 222 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 ATP13A3Q9H7F0 1226 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 PCDHB16Q9NRJ7 776 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 PNO1Q9NRX1 252 aaKnown RBP4.38□□□□□ -1.71
NCOA1-201ENST00000288599 CDH22Q9UJ99 828 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 HCN2Q9UL51 889 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 LOC110117498-PIK3R3F6TDL0 507 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 STK16O75716 305 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 FARS2O95363 451 aaKnown RBP4.38□□□□□ -1.71
NCOA1-201ENST00000288599 GLUD1P00367 558 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 ZNF16P17020 682 aaPredicted RBP4.38□□□□□ -1.71
NCOA1-201ENST00000288599 PNPLA4P41247 253 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 PDIA2Q13087 525 aaKnown RBP4.38□□□□□ -1.71
NCOA1-201ENST00000288599 RAPSNQ13702 412 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 TIGD5Q53EQ6 642 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 TNNI3KQ59H18 835 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 CASP12Q6UXS9 341 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 ARHGAP36Q6ZRI8 547 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 PIK3R3Q92569 461 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 TOP1MTQ969P6 601 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 GAL3ST4Q96RP7 486 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 OSMRQ99650 979 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 ERP44Q9BS26 406 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 MROH8Q9H579 483 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 PTPRHQ9HD43 1115 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 PTTG2Q9NZH5 202 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 PCDHGB7Q9Y5F8 929 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 GMEB1Q9Y692 573 aa4.38□□□□□ -1.71
NCOA1-201ENST00000288599 GMNCA6NCL1 334 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 ANKRD61A6NGH8 418 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 H3BMQ9 156 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 HAS3O00219 553 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 GAS2O43903 313 aaKnown RBP4.37□□□□□ -1.71
NCOA1-201ENST00000288599 ATG7O95352 703 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 TGM6O95932 706 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 FAM153BP0C7A2 387 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 SLC35G4P0C7Q5 338 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 GCFC2P16383 781 aaKnown RBP4.37□□□□□ -1.71
NCOA1-201ENST00000288599 CHRNB2P17787 502 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 ERCC2P18074 760 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 PRPH2P23942 346 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 NRIP1P48552 1158 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 ENTPD1P49961 510 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 RAB27AP51159 221 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 ZBED5Q49AG3 693 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 RNASE12Q5GAN4 147 aaKnown RBP4.37□□□□□ -1.71
NCOA1-201ENST00000288599 EOGTQ5NDL2 527 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 ZDHHC20Q5W0Z9 365 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 CMTR2Q8IYT2 770 aaKnown RBP4.37□□□□□ -1.71
NCOA1-201ENST00000288599 KRT35Q92764 455 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 NSMCE2Q96MF7 247 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 COG8Q96MW5 612 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 AGAP3Q96P47 875 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 RAB11FIP5Q9BXF6 653 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 BARHL1Q9BZE3 327 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 GNB4Q9HAV0 340 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 TMEM138Q9NPI0 162 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 PHPT1Q9NRX4 125 aaPredicted RBP4.37□□□□□ -1.71
NCOA1-201ENST00000288599 ACAD8Q9UKU7 415 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 KCNIP3Q9Y2W7 256 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 PARP4Q9UKK3 1724 aaKnown RBP4.37□□□□□ -1.71
NCOA1-201ENST00000288599 OVOS2A0A0G2JMS6 1433 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 WDR19Q8NEZ3 1342 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 NT5C1B-RDH14C9J2C7 533 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 PSTPIP1O43586 416 aa4.37□□□□□ -1.71
NCOA1-201ENST00000288599 CNOT3O75175 753 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms