RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 XIAPP98170 497 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 TTC31Q49AM3 519 aaPredicted RBP18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 TJAP1Q5JTD0 557 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 ZDHHC20Q5W0Z9 365 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 HSD11B1LQ7Z5J1 315 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 EXOC3L1Q86VI1 746 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 LMNTD2Q8IXW0 634 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 RAVER1Q8IY67 606 aaKnown RBP18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 FLCNQ8NFG4 579 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 GABPB2Q8TAK5 448 aaPredicted RBP18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 FAM76AQ8TAV0 307 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 NSMCE4AQ9NXX6 385 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 PKD2L2Q9NZM6 624 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 SLC17A6Q9P2U8 582 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 TRIOO75962 3097 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 FOXO6A8MYZ6 492 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 UGT1A9O60656 530 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 INHBAP08476 426 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 NR1D1P20393 614 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 ATP5DP30049 168 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 MC4RP32245 332 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 LIG3P49916 1009 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 TAS2R38P59533 333 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 SFSWAPQ12872 951 aaKnown RBP18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 PEX6Q13608 980 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 ZNF470Q6ECI4 717 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 MICALCLQ6ZW33 695 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 USP30Q70CQ3 517 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 GPR26Q8NDV2 337 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 GPR150Q8NGU9 434 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 GANCQ8TET4 914 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 MZB1Q8WU39 189 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 PLEKHG4BQ96PX9 1271 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 CPNE1Q99829 537 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 WRAP53Q9BUR4 548 aaKnown RBP18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 UGT1A7Q9HAW7 530 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 UGT1A10Q9HAW8 530 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 UGT1A8Q9HAW9 530 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 IL26Q9NPH9 171 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 ZNF180Q9UJW8 692 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 APPL1Q9UKG1 709 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 PSAT1Q9Y617 370 aa18.86■□□□□ 0.61
PDLIM3-202ENST00000284770 RGSL1A5PLK6 1076 aa18.85■□□□□ 0.61
PDLIM3-202ENST00000284770 CD3EAPO15446 510 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-202ENST00000284770 TSPAN6O43657 245 aa18.85■□□□□ 0.61
PDLIM3-202ENST00000284770 ACADMP11310 421 aa18.85■□□□□ 0.61
PDLIM3-202ENST00000284770 SPAM1P38567 509 aa18.85■□□□□ 0.61
PDLIM3-202ENST00000284770 RPS9P46781 194 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-202ENST00000284770 MRNIPQ6NTE8 343 aa18.85■□□□□ 0.61
PDLIM3-202ENST00000284770 KBTBD6Q86V97 674 aa18.85■□□□□ 0.61
PDLIM3-202ENST00000284770 DENND6AQ8IWF6 608 aa18.85■□□□□ 0.61
PDLIM3-202ENST00000284770 CHRDQ9H2X0 955 aa18.85■□□□□ 0.61
PDLIM3-202ENST00000284770 RAD18Q9NS91 495 aa18.85■□□□□ 0.61
PDLIM3-202ENST00000284770 CATSPERZQ9NTU4 200 aa18.85■□□□□ 0.61
PDLIM3-202ENST00000284770 TXNDC16Q9P2K2 825 aa18.85■□□□□ 0.61
PDLIM3-202ENST00000284770 FNDC3AQ9Y2H6 1198 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-202ENST00000284770 SIT1Q9Y3P8 196 aa18.85■□□□□ 0.61
PDLIM3-202ENST00000284770 GAPDHSO14556 408 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 FAM155BO75949 473 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 FOXN2P32314 431 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 SIGLEC14Q08ET2 396 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 CTBP1Q13363 440 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 FASTKD1Q53R41 847 aaKnown RBP18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 PACS1Q6VY07 963 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 RFLNAQ6ZTI6 216 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 KIAA0408Q6ZU52 694 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 Q6ZVL8 140 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 TECPR1Q7Z6L1 1165 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 STRA8Q7Z7C7 330 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 TRABD2AQ86V40 505 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 CILP2Q8IUL8 1156 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 C2CD4AQ8NCU7 369 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 HMGB4Q8WW32 186 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 CDH19Q9H159 772 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 C2orf42Q9NWW7 574 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 MARCH4Q9P2E8 410 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 FBXO5Q9UKT4 447 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 FZD4Q9ULV1 537 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 NCKAP1Q9Y2A7 1128 aa18.84■□□□□ 0.61
PDLIM3-202ENST00000284770 GLYATL1P3A0A0U1RQE8 302 aa18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 MMP20O60882 483 aa18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 SRP72O76094 671 aaKnown RBP18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 HPDP32754 393 aaPredicted RBP18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 GP5P40197 560 aa18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 ETV3P41162 512 aa18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 SLC1A2P43004 574 aa18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 ACOX1Q15067 660 aa18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 KIAA1324Q6UXG2 1013 aaKnown RBP18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 FAM151BQ6UXP7 276 aa18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 KDM7AQ6ZMT4 941 aa18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 OTUD6BQ8N6M0 293 aa18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 CXorf40AQ8TE69 158 aa18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 EDAQ92838 391 aa18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 COQ10AQ96MF6 247 aa18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 ACTL7BQ9Y614 415 aa18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 SLC30A1Q9Y6M5 507 aa18.83■□□□□ 0.61
PDLIM3-202ENST00000284770 GOLGA8CPA6NN73 597 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 PLRG1O43660 514 aaKnown RBP18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 PRAMEF1O95521 474 aa18.83■□□□□ 0.6
PDLIM3-202ENST00000284770 AHSGP02765 367 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms