RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 SLC7A1P30825 629 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 NNMTP40261 264 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 CCL23P55773 120 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 SLC25A11Q02978 314 aaKnown RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 USP41Q3LFD5 358 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 SPANXN2Q5MJ10 180 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 DEPDC1Q5TB30 811 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 SLC9A4Q6AI14 798 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 CRTC3Q6UUV7 619 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 TMEM26Q6ZUK4 368 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 KCTD8Q6ZWB6 473 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 TTC30BQ8N4P2 665 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 PTGR2Q8N8N7 351 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 NXNL1Q96CM4 212 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 ASB9Q96DX5 294 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 CENPNQ96H22 339 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 RIBC2Q9H4K1 309 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 CHRAC1Q9NRG0 131 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 LEF1Q9UJU2 399 aaPredicted RBP11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 DGKBQ9Y6T7 804 aa11.53□□□□□ -0.56
CLSTN3-201ENST00000266546 RAD51BO15315 384 aa11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 UGT1A6P19224 532 aa11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 UGT1A1P22309 533 aa11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 UGT1A4P22310 534 aa11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 UGT1A3P35503 534 aa11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 UGT1A5P35504 534 aa11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 RPS9P46781 194 aaKnown RBP11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 MYBPC3Q14896 1274 aa11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 XKR4Q5GH76 650 aa11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 BRMS1LQ5PSV4 323 aa11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 NECAB2Q7Z6G3 386 aa11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 SLCO6A1Q86UG4 719 aa11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 CLYBLQ8N0X4 340 aa11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 C2orf15Q8WU43 125 aaKnown RBP11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 APOL4Q9BPW4 351 aa11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 APOL5Q9BWW9 433 aa11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 ENTPD7Q9NQZ7 604 aa11.52□□□□□ -0.56
CLSTN3-201ENST00000266546 PNMA8CA0A1B0GUJ8 204 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 BBIP1A8MTZ0 92 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 PPM1AP35813 382 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 RGS4P49798 205 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 UBE3AQ05086 875 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 PLD1Q13393 1074 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 SEMA5AQ13591 1074 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 ZRANB3Q5FWF4 1079 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 ARMCX4Q5H9R4 360 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 STXBP5Q5T5C0 1151 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 REP15Q6BDI9 236 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 PTRHD1Q6GMV3 140 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 ALKAL1Q6UXT8 129 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 ARL10Q8N8L6 244 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 DQX1Q8TE96 717 aaKnown RBP11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 TRPM5Q9NZQ8 1165 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 TEKT2Q9UIF3 430 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 VPS9D1Q9Y2B5 631 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 GPC6Q9Y625 555 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 PLXNB2O15031 1838 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 A0A0G2JMZ2 1700 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 CLDN25C9JDP6 229 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 MFSD11O43934 449 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 KATNA1O75449 491 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 MSH3P20585 1137 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 HTR7P34969 479 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 MAGEA8P43361 318 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 MON1AQ86VX9 555 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 ADHFE1Q8IWW8 467 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 FSTL5Q8N475 847 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 SNX31Q8N9S9 440 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 PCED1BQ96HM7 432 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 RPRD1AQ96P16 312 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 TKTL2Q9H0I9 626 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 SEMA4BQ9NPR2 832 aaPredicted RBP11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 OTOFQ9HC10 1997 aa11.52□□□□□ -0.57
CLSTN3-201ENST00000266546 PDZK1P1A8MUH7 402 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 LSM1O15116 133 aaKnown RBP11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 ZSCAN9O15535 394 aaPredicted RBP11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 DNAJA2O60884 412 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 MT-ND1P03886 318 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 NR4A1P22736 598 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 TKTP29401 623 aaKnown RBP11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 HARS2P49590 506 aaKnown RBP11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 BNIP3Q12983 259 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 PAGE2BQ5JRK9 111 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 NUDT18Q6ZVK8 323 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 LEMD2Q8NC56 503 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 PGLYRP2Q96PD5 576 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 AGAP2Q99490 1192 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 LPIN3Q9BQK8 851 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 TBCDQ9BTW9 1192 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 TTPALQ9BTX7 342 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 TRMOQ9BU70 441 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 FANCEQ9HB96 536 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 TBCCD1Q9NVR7 557 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 LSM7Q9UK45 103 aaKnown RBP11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 PTGESO14684 152 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 SLC11A2P49281 568 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 PCLAFQ15004 111 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 EPGNQ6UW88 154 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 XKR5Q6UX68 686 aa11.51□□□□□ -0.57
CLSTN3-201ENST00000266546 CTU1Q7Z7A3 348 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms