RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 CAPN3P20807 821 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 SLC7A1P30825 629 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 LHX1P48742 406 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 STX1BP61266 288 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 PLIN5Q00G26 463 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 UNC50Q53HI1 259 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 TMEM53Q6P2H8 277 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 PTGR2Q8N8N7 351 aaPredicted RBP10.05□□□□□ -0.8
LIG3-201ENST00000262327 OR13J1Q8NGT2 312 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 OR10T2Q8NGX3 314 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 TRPC4APQ8TEL6 797 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 NUDT8Q8WV74 236 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 C19orf60Q96EN9 201 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 PGAP3Q96FM1 320 aaPredicted RBP10.05□□□□□ -0.8
LIG3-201ENST00000262327 ABHD8Q96I13 439 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 B3GALT6Q96L58 329 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 NMUR1Q9HB89 426 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 EML4Q9HC35 981 aaKnown RBP10.05□□□□□ -0.8
LIG3-201ENST00000262327 ENTPD7Q9NQZ7 604 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 SMOXQ9NWM0 555 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 MAP10Q9P2G4 905 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 CDC14AQ9UNH5 594 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 ST3GAL5Q9UNP4 418 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 TSC2P49815 1807 aa10.05□□□□□ -0.8
LIG3-201ENST00000262327 TCRBV3S1A0A5B6 114 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 ARL5CA6NH57 179 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 BOLA2-SMG1P6H3BVE0 249 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 NDUFB5O43674 189 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 TFPTP0C1Z6 253 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 GRIK1P39086 918 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 ADARP55265 1226 aaKnown RBP10.04□□□□□ -0.8
LIG3-201ENST00000262327 CTBSQ01459 385 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 KIAA0930Q6ICG6 404 aaPredicted RBP10.04□□□□□ -0.8
LIG3-201ENST00000262327 C16orf87Q6PH81 154 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 ISCA2Q86U28 154 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 BLOC1S5Q8TDH9 187 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 PBXIP1Q96AQ6 731 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 TSGA13Q96PP4 275 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 RANBP9Q96S59 729 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 SLC25A23Q9BV35 468 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 OSBPL11Q9BXB4 747 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 TMEM181Q9P2C4 612 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 DNAJC15Q9Y5T4 150 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 ACTL7AQ9Y615 435 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 HS3ST4Q9Y661 456 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 ARL5AQ9Y689 179 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 E9PAM4 449 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 IRAK2O43187 625 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 CACNG3O60359 315 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 SERPINH1P50454 418 aaKnown RBP10.04□□□□□ -0.8
LIG3-201ENST00000262327 HK2P52789 917 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 DIO3P55073 304 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 DNAJB13P59910 316 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 GSTM4Q03013 218 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 RABL3Q5HYI8 236 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 SAMD4BQ5PRF9 694 aaKnown RBP10.04□□□□□ -0.8
LIG3-201ENST00000262327 ZNF678Q5SXM1 525 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 LARP4Q71RC2 724 aaKnown RBP eCLIP10.04□□□□□ -0.8
LIG3-201ENST00000262327 EPHX4Q8IUS5 362 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 TUBGCP3Q96CW5 907 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 HMCESQ96FZ2 354 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 SMIM14Q96QK8 99 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 SEMA4BQ9NPR2 832 aaPredicted RBP10.04□□□□□ -0.8
LIG3-201ENST00000262327 PFDN4Q9NQP4 134 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 RGS18Q9NS28 235 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 FAM105AQ9NUU6 356 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 WBP1LQ9NX94 342 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 PLK2Q9NYY3 685 aa10.04□□□□□ -0.8
LIG3-201ENST00000262327 INPP4BO15327 924 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 PSMD3O43242 534 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 STAMBPO95630 424 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 TBX18O95935 607 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 ZNF23P17027 643 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 GPR15P49685 360 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 SLC5A3P53794 718 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 EMP3P54852 163 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 TXNL4AP83876 142 aaKnown RBP10.03□□□□□ -0.8
LIG3-201ENST00000262327 PLCL1Q15111 1095 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 RPS6KA2Q15349 733 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 MAPRE2Q15555 327 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 ALFQ53S48 1182 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 TTC33Q6PID6 262 aaPredicted RBP10.03□□□□□ -0.8
LIG3-201ENST00000262327 CILP2Q8IUL8 1156 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 TMEM126BQ8IUX1 230 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 AFAP1L2Q8N4X5 818 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 OR2T34Q8NGX1 318 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 OR2T3Q8NH03 318 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 PSMG2Q969U7 264 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 GLT1D1Q96MS3 346 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 TMEM74Q96NL1 305 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.03□□□□□ -0.8
LIG3-201ENST00000262327 OSER1Q9NX31 292 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 SLAMF8Q9P0V8 285 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 EVLQ9UI08 416 aaPredicted RBP10.03□□□□□ -0.8
LIG3-201ENST00000262327 CDH9Q9ULB4 789 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 OAZ3Q9UMX2 235 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 FAM50BQ9Y247 325 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 A0A1W2PQH9 124 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 BAIAP3O94812 1187 aa10.03□□□□□ -0.8
LIG3-201ENST00000262327 CDK14O94921 469 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms