RNA–Protein interactions for RNA: ENST00000260643.6

PREB-201, Transcript of prolactin regulatory element binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREB, Length 2,166 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-201ENST00000260643 CLIC3O95833 236 aa23.32■■□□□ 1.32
PREB-201ENST00000260643 IGFBP6P24592 240 aaPredicted RBP23.32■■□□□ 1.32
PREB-201ENST00000260643 SERPINH1P50454 418 aaKnown RBP23.32■■□□□ 1.32
PREB-201ENST00000260643 YBX1P67809 324 aaKnown RBP23.32■■□□□ 1.32
PREB-201ENST00000260643 FXNQ16595 210 aa23.32■■□□□ 1.32
PREB-201ENST00000260643 DUSP28Q4G0W2 176 aa23.32■■□□□ 1.32
PREB-201ENST00000260643 BRMS1LQ5PSV4 323 aa23.32■■□□□ 1.32
PREB-201ENST00000260643 ANKRD23Q86SG2 305 aa23.32■■□□□ 1.32
PREB-201ENST00000260643 CPNE9Q8IYJ1 553 aa23.32■■□□□ 1.32
PREB-201ENST00000260643 TDRD1Q9BXT4 1180 aaKnown RBP23.32■■□□□ 1.32
PREB-201ENST00000260643 CDH9Q9ULB4 789 aa23.32■■□□□ 1.32
PREB-201ENST00000260643 BOLA2-SMG1P6H3BVE0 249 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 VPS4BO75351 444 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 CD1DP15813 335 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 CD247P20963 164 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 GSK3BP49841 420 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 CBX2Q14781 532 aaPredicted RBP23.31■■□□□ 1.32
PREB-201ENST00000260643 OGFOD2Q6N063 350 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 ZNF467Q7Z7K2 595 aaPredicted RBP23.31■■□□□ 1.32
PREB-201ENST00000260643 RNF168Q8IYW5 571 aaPredicted RBP23.31■■□□□ 1.32
PREB-201ENST00000260643 ACDQ96AP0 544 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 ANAPC2Q9UJX6 822 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 ZNF711Q9Y462 761 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 PCDHGA4Q9Y5G9 962 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 OAS3Q9Y6K5 1087 aaKnown RBP23.31■■□□□ 1.32
PREB-201ENST00000260643 A0A1W2PP18 115 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 MROH6A6NGR9 719 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 FOXD2O60548 495 aaPredicted RBP23.31■■□□□ 1.32
PREB-201ENST00000260643 SNAI1O95863 264 aaPredicted RBP23.31■■□□□ 1.32
PREB-201ENST00000260643 SMPD1P17405 629 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 UGT1A1P22309 533 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 UGT1A4P22310 534 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 UGT1A3P35503 534 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 UGT1A5P35504 534 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 CDH13P55290 713 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 KCNC4Q03721 635 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 FSCN1Q16658 493 aaKnown RBP23.31■■□□□ 1.32
PREB-201ENST00000260643 CHPT1Q8WUD6 406 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 TRIM62Q9BVG3 475 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 SIK2Q9H0K1 926 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 TUBB1Q9H4B7 451 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 ALG2Q9H553 416 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 GNPTGQ9UJJ9 305 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 BLOC1S6Q9UL45 172 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 GPR45Q9Y5Y3 372 aa23.31■■□□□ 1.32
PREB-201ENST00000260643 TYW5A2RUC4 315 aaKnown RBP23.3■■□□□ 1.32
PREB-201ENST00000260643 INPP4BO15327 924 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 BAIAP3O94812 1187 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 FDXRP22570 491 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 EEFSECP57772 596 aaKnown RBP23.3■■□□□ 1.32
PREB-201ENST00000260643 RELAQ04206 551 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 NFATC3Q12968 1075 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 NANOGP8Q6NSW7 305 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 ZNF773Q6PK81 442 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 KDELC2Q7Z4H8 507 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 OFCC1Q8IZS5 231 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 PDPRQ8NCN5 879 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 NAA50Q9GZZ1 169 aaKnown RBP23.3■■□□□ 1.32
PREB-201ENST00000260643 MID1IP1Q9NPA3 183 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 COQ6Q9Y2Z9 468 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 IRAK2O43187 625 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 LDLRP01130 860 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 TFPTP0C1Z6 253 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 HOXB8P17481 243 aaPredicted RBP23.3■■□□□ 1.32
PREB-201ENST00000260643 CHRM3P20309 590 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 ETFBP38117 255 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 BAG6P46379 1132 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 TUBA3CQ13748 450 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 AASDHQ4L235 1098 aaPredicted RBP23.3■■□□□ 1.32
PREB-201ENST00000260643 NOMO2Q5JPE7 1267 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 XKR5Q6UX68 686 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 PTGR2Q8N8N7 351 aaPredicted RBP23.3■■□□□ 1.32
PREB-201ENST00000260643 RHEBL1Q8TAI7 183 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 TRUB1Q8WWH5 349 aaKnown RBP23.3■■□□□ 1.32
PREB-201ENST00000260643 IMP4Q96G21 291 aaKnown RBP23.3■■□□□ 1.32
PREB-201ENST00000260643 PAIP2BQ9ULR5 123 aaKnown RBP23.3■■□□□ 1.32
PREB-201ENST00000260643 B3GNT3Q9Y2A9 372 aa23.3■■□□□ 1.32
PREB-201ENST00000260643 BPTFQ12830 3046 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 CROCCQ5TZA2 2017 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 FUOMA2VDF0 154 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 SEC14L2O76054 403 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 ZBTB11O95625 1053 aaPredicted RBP23.29■■□□□ 1.32
PREB-201ENST00000260643 SMIM10L2AP0DMW4 78 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 SMIM10L2BP0DMW5 78 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 SUOXP51687 545 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 BMXP51813 675 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 FOXA1P55317 472 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 RCAN2Q14206 197 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 RAB44Q7Z6P3 723 aaPredicted RBP23.29■■□□□ 1.32
PREB-201ENST00000260643 OSCP1Q8WVF1 389 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 FATE1Q969F0 183 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 TSPYL2Q9H2G4 693 aaPredicted RBP23.29■■□□□ 1.32
PREB-201ENST00000260643 POPDC3Q9HBV1 291 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 NDFIP2Q9NV92 336 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 GMIPQ9P107 970 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 FNIP2Q9P278 1114 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 IFT80Q9P2H3 777 aaPredicted RBP23.29■■□□□ 1.32
PREB-201ENST00000260643 GIMAP2Q9UG22 337 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 POLG2Q9UHN1 485 aa23.29■■□□□ 1.32
PREB-201ENST00000260643 SH3BP1Q9Y3L3 701 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms