RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 AARSD1Q9BTE6 412 aaKnown RBP17.23■□□□□ 0.35
PCCB-201ENST00000251654 UNKQ9C0B0 810 aaKnown RBP17.23■□□□□ 0.35
PCCB-201ENST00000251654 NSUN3Q9H649 340 aaKnown RBP17.23■□□□□ 0.35
PCCB-201ENST00000251654 KCNK13Q9HB14 408 aa17.23■□□□□ 0.35
PCCB-201ENST00000251654 OXSMQ9NWU1 459 aa17.23■□□□□ 0.35
PCCB-201ENST00000251654 MID2Q9UJV3 735 aa17.23■□□□□ 0.35
PCCB-201ENST00000251654 DCTN4Q9UJW0 460 aa17.23■□□□□ 0.35
PCCB-201ENST00000251654 FNDC3AQ9Y2H6 1198 aaKnown RBP17.23■□□□□ 0.35
PCCB-201ENST00000251654 MED16Q9Y2X0 877 aa17.23■□□□□ 0.35
PCCB-201ENST00000251654 RRP15Q9Y3B9 282 aaKnown RBP17.23■□□□□ 0.35
PCCB-201ENST00000251654 PPIL1Q9Y3C6 166 aa17.23■□□□□ 0.35
PCCB-201ENST00000251654 TTC34A8MYJ7 566 aa17.22■□□□□ 0.35
PCCB-201ENST00000251654 SLC26A3P40879 764 aa17.22■□□□□ 0.35
PCCB-201ENST00000251654 TTPAP49638 278 aa17.22■□□□□ 0.35
PCCB-201ENST00000251654 CSHL1Q14406 222 aa17.22■□□□□ 0.35
PCCB-201ENST00000251654 RNF187Q5TA31 235 aaPredicted RBP17.22■□□□□ 0.35
PCCB-201ENST00000251654 NAPRTQ6XQN6 538 aa17.22■□□□□ 0.35
PCCB-201ENST00000251654 TSPAN33Q86UF1 283 aa17.22■□□□□ 0.35
PCCB-201ENST00000251654 FITM2Q8N6M3 262 aa17.22■□□□□ 0.35
PCCB-201ENST00000251654 PAF1Q8N7H5 531 aa17.22■□□□□ 0.35
PCCB-201ENST00000251654 SCRN2Q96FV2 425 aa17.22■□□□□ 0.35
PCCB-201ENST00000251654 BIRC8Q96P09 236 aa17.22■□□□□ 0.35
PCCB-201ENST00000251654 CIPCQ9C0C6 399 aa17.22■□□□□ 0.35
PCCB-201ENST00000251654 MRPL46Q9H2W6 279 aaKnown RBP17.22■□□□□ 0.35
PCCB-201ENST00000251654 KDM4CQ9H3R0 1056 aa17.22■□□□□ 0.35
PCCB-201ENST00000251654 UBA6A0AVT1 1052 aaPredicted RBP17.21■□□□□ 0.35
PCCB-201ENST00000251654 LYPLA1O75608 230 aaPredicted RBP17.21■□□□□ 0.35
PCCB-201ENST00000251654 CLDN7O95471 211 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 LTA4HP09960 611 aaKnown RBP17.21■□□□□ 0.35
PCCB-201ENST00000251654 CCDC166P0CW27 439 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 MYL2P10916 166 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 SLC1A6P48664 564 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 RAD51Q06609 339 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 FAM83EQ2M2I3 478 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 TECRLQ5HYJ1 363 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 TANGO2Q6ICL3 276 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 GRIN3AQ8TCU5 1115 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 WFIKKN2Q8TEU8 576 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 SCYL1Q96KG9 808 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 SORT1Q99523 831 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 MRPL57Q9BQC6 102 aaKnown RBP17.21■□□□□ 0.35
PCCB-201ENST00000251654 FAM96AQ9H5X1 160 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 POPDC3Q9HBV1 291 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 HPS4Q9NQG7 708 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 CDH7Q9ULB5 785 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 WASF2Q9Y6W5 498 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 A0A0G2JND7 137 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 TRIM13O60858 407 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 NDUFS3O75489 264 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 SRPRAP08240 638 aaKnown RBP17.21■□□□□ 0.35
PCCB-201ENST00000251654 ZNF37AP17032 561 aaPredicted RBP17.21■□□□□ 0.35
PCCB-201ENST00000251654 CACNG1Q06432 222 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 LACTB2Q53H82 288 aaPredicted RBP17.21■□□□□ 0.35
PCCB-201ENST00000251654 ZRANB3Q5FWF4 1079 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 AARS2Q5JTZ9 985 aaKnown RBP17.21■□□□□ 0.35
PCCB-201ENST00000251654 COL13A1Q5TAT6 717 aaPredicted RBP17.21■□□□□ 0.35
PCCB-201ENST00000251654 AGAP9Q5VTM2 703 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 CRTC1Q6UUV9 634 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 VITQ6UXI7 678 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 ECT2Q9H8V3 914 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 VPS9D1Q9Y2B5 631 aa17.21■□□□□ 0.35
PCCB-201ENST00000251654 TCF20Q9UGU0 1960 aaKnown RBP17.2■□□□□ 0.34
PCCB-201ENST00000251654 OR1I1O60431 355 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 PRAMEF1O95521 474 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 ASLP04424 464 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 ATP5BP06576 529 aaKnown RBP17.2■□□□□ 0.34
PCCB-201ENST00000251654 BPIP17213 487 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 LHCGRP22888 699 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 NNMTP40261 264 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 KPNA2P52292 529 aaKnown RBP17.2■□□□□ 0.34
PCCB-201ENST00000251654 ADARP55265 1226 aaKnown RBP17.2■□□□□ 0.34
PCCB-201ENST00000251654 FCHO2Q0JRZ9 810 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 SETMARQ53H47 684 aaPredicted RBP17.2■□□□□ 0.34
PCCB-201ENST00000251654 FAM151BQ6UXP7 276 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 GDPD4Q6W3E5 623 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 TPRG1Q6ZUI0 275 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 USP45Q70EL2 814 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 CRLF3Q8IUI8 442 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 TDHQ8IZJ6 230 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 NXPE3Q969Y0 559 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 IL26Q9NPH9 171 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 BRWD1Q9NSI6 2320 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 DENND4AQ7Z401 1863 aa17.2■□□□□ 0.34
PCCB-201ENST00000251654 A8MX80 341 aa17.19■□□□□ 0.34
PCCB-201ENST00000251654 PRRT4C9JH25 899 aa17.19■□□□□ 0.34
PCCB-201ENST00000251654 DLX3O60479 287 aa17.19■□□□□ 0.34
PCCB-201ENST00000251654 SRP72O76094 671 aaKnown RBP17.19■□□□□ 0.34
PCCB-201ENST00000251654 FMO4P31512 558 aa17.19■□□□□ 0.34
PCCB-201ENST00000251654 RECQLP46063 649 aaPredicted RBP17.19■□□□□ 0.34
PCCB-201ENST00000251654 SLC6A11P48066 632 aa17.19■□□□□ 0.34
PCCB-201ENST00000251654 CORO7P57737 925 aa17.19■□□□□ 0.34
PCCB-201ENST00000251654 ABCE1P61221 599 aaKnown RBP17.19■□□□□ 0.34
PCCB-201ENST00000251654 SEMG2Q02383 582 aa17.19■□□□□ 0.34
PCCB-201ENST00000251654 CCDC15Q0P6D6 951 aa17.19■□□□□ 0.34
PCCB-201ENST00000251654 PDGFRLQ15198 375 aa17.19■□□□□ 0.34
PCCB-201ENST00000251654 LIPMQ5VYY2 423 aa17.19■□□□□ 0.34
PCCB-201ENST00000251654 LRRC66Q68CR7 880 aa17.19■□□□□ 0.34
PCCB-201ENST00000251654 KLHL32Q96NJ5 620 aa17.19■□□□□ 0.34
PCCB-201ENST00000251654 HEPHQ9BQS7 1158 aa17.19■□□□□ 0.34
PCCB-201ENST00000251654 TMEM120AQ9BXJ8 343 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms