RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 GOLGA6CA6NDK9 693 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 GOLGA6BA6NDN3 693 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 TMEM202A6NGA9 273 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 GOLGA8CPA6NN73 597 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 PMPCBO75439 489 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 CLDN7O95471 211 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 TOP3BO95985 862 aaKnown RBP12.73□□□□□ -0.37
VPREB3-201ENST00000248948 TNFP01375 233 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 ANXA6P08133 673 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 GOLGA6DP0CG33 693 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 HLA-DPA1P20036 260 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 GPR1P46091 355 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 SPINT3P49223 89 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 DUSP3P51452 185 aaPredicted RBP12.73□□□□□ -0.37
VPREB3-201ENST00000248948 HENMT1Q5T8I9 393 aaKnown RBP12.73□□□□□ -0.37
VPREB3-201ENST00000248948 SEL1L2Q5TEA6 688 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 CCDC70Q6NSX1 233 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 AADACL2Q6P093 401 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 TMPRSS7Q7RTY8 843 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 PID1Q7Z2X4 250 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 GKN2Q86XP6 184 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 HID1Q8IV36 788 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 OR1E3Q8WZA6 343 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 GLMNQ92990 594 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 TSACCQ96A04 125 aaPredicted RBP12.73□□□□□ -0.37
VPREB3-201ENST00000248948 OXNAD1Q96HP4 312 aaPredicted RBP12.73□□□□□ -0.37
VPREB3-201ENST00000248948 SMIM14Q96QK8 99 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 LGR4Q9BXB1 951 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 FSD1LQ9BXM9 530 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 TMEM121BQ9BXQ6 578 aaPredicted RBP12.73□□□□□ -0.37
VPREB3-201ENST00000248948 FRMD8Q9BZ67 464 aaPredicted RBP12.73□□□□□ -0.37
VPREB3-201ENST00000248948 ABCG8Q9H221 673 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 CARD9Q9H257 536 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 ZFYVE1Q9HBF4 777 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 GOLGA6AQ9NYA3 693 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 HACD3Q9P035 362 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 SLC17A4Q9Y2C5 497 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 U3KQA8 63 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 FRYQ5TBA9 3013 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 WDFY3Q8IZQ1 3526 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 USP24Q9UPU5 2620 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 TMEM8BA6NDV4 472 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 KCNN4O15554 427 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 GCATO75600 419 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 ANXA9O76027 345 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 FGF1P05230 155 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 IVLP07476 585 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 CTSEP14091 401 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 RPIAP49247 311 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 WNT3AP56704 352 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 DEFB133Q30KQ1 61 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 PDPK2PQ6A1A2 396 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 DARS2Q6PI48 645 aaKnown RBP12.72□□□□□ -0.37
VPREB3-201ENST00000248948 DHRS13Q6UX07 377 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 UNQ6494/PRO21346Q6UXR6 183 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 LYSMD3Q7Z3D4 306 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 TMPRSS12Q86WS5 348 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 ARL10Q8N8L6 244 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 TRIM58Q8NG06 486 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 SCG3Q8WXD2 468 aaKnown RBP12.72□□□□□ -0.37
VPREB3-201ENST00000248948 GATA6Q92908 595 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 NAT6Q93015 286 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 SPATA13Q96N96 652 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 FRMD8P1Q9BZ68 369 aaPredicted RBP12.72□□□□□ -0.37
VPREB3-201ENST00000248948 CLPBQ9H078 707 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 TRABDQ9H4I3 376 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 CAAP1Q9H8G2 361 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 LZTFL1Q9NQ48 299 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 UBP1Q9NZI7 540 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 VPS18Q9P253 973 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 CD84Q9UIB8 345 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 DOLKQ9UPQ8 538 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 AAR2Q9Y312 384 aaKnown RBP12.72□□□□□ -0.37
VPREB3-201ENST00000248948 EPG5Q9HCE0 2579 aa12.72□□□□□ -0.37
VPREB3-201ENST00000248948 A0A0U1RQS6 177 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 CEACAM5P06731 702 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 SPINK2P20155 84 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 GEMP55040 296 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 E2F1Q01094 437 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 NR0B2Q15466 257 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 SLC1A5Q15758 541 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 ZNF569Q5MCW4 686 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 ANKRD20A2Q5SQ80 823 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 MEI1Q5TIA1 1274 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 ANKRD20A1Q5TYW2 823 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 ANKRD20A3Q5VUR7 823 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 KCTD16Q68DU8 428 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 CCNI2Q6ZMN8 369 aaPredicted RBP12.71□□□□□ -0.37
VPREB3-201ENST00000248948 RFLNAQ6ZTI6 216 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 TMC3Q7Z5M5 1100 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 KLHDC8BQ8IXV7 354 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 CACTIN-AS1Q8N1I8 211 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 IPMKQ8NFU5 416 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 SLC35B2Q8TB61 432 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 SCAMP4Q969E2 229 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 LRRC45Q96CN5 670 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 SCARF2Q96GP6 870 aaPredicted RBP12.71□□□□□ -0.37
VPREB3-201ENST00000248948 COX14Q96I36 57 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 HIC2Q96JB3 615 aa12.71□□□□□ -0.37
VPREB3-201ENST00000248948 MRGPRX2Q96LB1 330 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms