RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 BRD9Q9H8M2 597 aa14.16□□□□□ -0.14
SDF2-201ENST00000247020 RAD18Q9NS91 495 aa14.16□□□□□ -0.14
SDF2-201ENST00000247020 PLXNA2O75051 1894 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 TRBV5-4A0A0C4DH59 114 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 NPIPB15A6NHN6 443 aaPredicted RBP14.15□□□□□ -0.14
SDF2-201ENST00000247020 NPC1O15118 1278 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 PHGDHO43175 533 aaKnown RBP14.15□□□□□ -0.14
SDF2-201ENST00000247020 LEFTY1O75610 366 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 TGDSO95455 350 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 CLDN7O95471 211 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 TOP3BO95985 862 aaKnown RBP14.15□□□□□ -0.14
SDF2-201ENST00000247020 SLC4A1P02730 911 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 F7P08709 466 aaPredicted RBP14.15□□□□□ -0.14
SDF2-201ENST00000247020 ITGALP20701 1170 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 BGNP21810 368 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 IRF9Q00978 393 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 PCLAFQ15004 111 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 FAM83EQ2M2I3 478 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 ZNF805Q5CZA5 627 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 ZRANB3Q5FWF4 1079 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 AGAP9Q5VTM2 703 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 CRTC1Q6UUV9 634 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 PARM1Q6UWI2 310 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 SNX20Q7Z614 316 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 TMIEQ8NEW7 156 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 SORCS1Q8WY21 1168 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 SUSD6Q92537 303 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 FGF14Q92915 247 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 NXPE3Q969Y0 559 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 C7orf26Q96N11 449 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 OLFM1Q99784 485 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 KXD1Q9BQD3 176 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 TSSK1BQ9BXA7 367 aa14.15□□□□□ -0.14
SDF2-201ENST00000247020 NFKBIL1Q9UBC1 381 aaPredicted RBP14.15□□□□□ -0.14
SDF2-201ENST00000247020 USP15Q9Y4E8 981 aaPredicted RBP14.15□□□□□ -0.14
SDF2-201ENST00000247020 ATXN2Q99700 1313 aaKnown RBP14.15□□□□□ -0.14
SDF2-201ENST00000247020 TICRRQ7Z2Z1 1910 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 PLXNB3Q9ULL4 1909 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 BPTFQ12830 3046 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 CCDC189A1A4V9 331 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 WDR91A4D1P6 747 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 GOLGA8CPA6NN73 597 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 AGAP14A8MT82 685 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 UPK3BL1B0FP48 263 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 UPK3BL2E5RIL1 263 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 ARNTLO00327 626 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 SRP72O76094 671 aaKnown RBP14.14□□□□□ -0.15
SDF2-201ENST00000247020 ESR1P03372 595 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 LTA4HP09960 611 aaKnown RBP14.14□□□□□ -0.15
SDF2-201ENST00000247020 CPA3P15088 417 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 SAT1P21673 171 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 RPS3P23396 243 aaKnown RBP eCLIP14.14□□□□□ -0.155e-7■■□□□ 12.2
SDF2-201ENST00000247020 GRK2P25098 689 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 GDI1P31150 447 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 VIPR1P32241 457 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 GRIA2P42262 883 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 RGS19P49795 217 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 KDSRQ06136 332 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 GRM2Q14416 872 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 FNDC3BQ53EP0 1204 aaKnown RBP14.14□□□□□ -0.15
SDF2-201ENST00000247020 PSAPL1Q6NUJ1 521 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 C16orf46Q6P387 395 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 KLC3Q6P597 504 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 SPATA21Q7Z572 469 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 LDB1Q86U70 411 aaPredicted RBP14.14□□□□□ -0.15
SDF2-201ENST00000247020 ZNF398Q8TD17 642 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 OR8D1Q8WZ84 308 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 UBXN10Q96LJ8 280 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 ELAC2Q9BQ52 826 aaKnown RBP14.14□□□□□ -0.15
SDF2-201ENST00000247020 MRPL57Q9BQC6 102 aaKnown RBP14.14□□□□□ -0.15
SDF2-201ENST00000247020 CDH19Q9H159 772 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 TMEM245Q9H330 911 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 SYTL2Q9HCH5 934 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 GPAMQ9HCL2 828 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 BPIFA1Q9NP55 256 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 TAS2R13Q9NYV9 303 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 THAP10Q9P2Z0 257 aaPredicted RBP14.14□□□□□ -0.15
SDF2-201ENST00000247020 SUN2Q9UH99 717 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 RUVBL2Q9Y230 463 aaKnown RBP14.14□□□□□ -0.15
SDF2-201ENST00000247020 CRYL1Q9Y2S2 319 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 PCDHB1Q9Y5F3 818 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 TCF20Q9UGU0 1960 aaKnown RBP14.14□□□□□ -0.15
SDF2-201ENST00000247020 PRRC2BQ5JSZ5 2229 aaKnown RBP14.14□□□□□ -0.15
SDF2-201ENST00000247020 COL4A2P08572 1712 aa14.14□□□□□ -0.15
SDF2-201ENST00000247020 GLYATL1P3A0A0U1RQE8 302 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 RGSL1A5PLK6 1076 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 ERICH4A6NGS2 130 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 ANHXE9PGG2 379 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 GAPDHSO14556 408 aaPredicted RBP14.13□□□□□ -0.15
SDF2-201ENST00000247020 SNNO75324 88 aaPredicted RBP14.13□□□□□ -0.15
SDF2-201ENST00000247020 KAT7O95251 611 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 PRAMEF1O95521 474 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 APODP05090 189 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 PYGLP06737 847 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 RBP1P09455 135 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 TROVE2P10155 538 aaKnown RBP eCLIP14.13□□□□□ -0.15
SDF2-201ENST00000247020 BPIP17213 487 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 ALDH3A1P30838 453 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 DCDC1P59894 354 aa14.13□□□□□ -0.15
SDF2-201ENST00000247020 ASPHQ12797 758 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms