RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 TRAF6Q9Y4K3 522 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 INMTO95050 263 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 MSS51Q4VC12 460 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 PLEKHG4Q58EX7 1191 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 YIPF4Q9BSR8 244 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.51□□□□□ -1.21
RIF1-201ENST00000243326 LRRC10BA6NIK2 292 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 UBXN8O00124 270 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 DNAJA3Q96EY1 480 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 GAD1Q99259 594 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 ACSS3Q9H6R3 686 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 OAS3Q9Y6K5 1087 aaKnown RBP7.51□□□□□ -1.21
RIF1-201ENST00000243326 GTF2E2P29084 291 aaKnown RBP7.51□□□□□ -1.21
RIF1-201ENST00000243326 CHRNA4P43681 627 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 STARP49675 285 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 RPS3AP61247 264 aaKnown RBP7.51□□□□□ -1.21
RIF1-201ENST00000243326 NDUFAF6Q330K2 333 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 USP7Q93009 1102 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 MCMBPQ9BTE3 642 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 NFKBIZQ9BYH8 718 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 NDOR1Q9UHB4 597 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 NDUFV1P49821 464 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 OR2B6P58173 313 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 TTC39CQ8N584 583 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 UBR7Q8N806 425 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 TBC1D17Q9HA65 648 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 ZNRF3Q9ULT6 936 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 DNMT3AQ9Y6K1 912 aaPredicted RBP7.51□□□□□ -1.21
RIF1-201ENST00000243326 FAM92AA1XBS5 289 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 NOTOA8MTQ0 251 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 AURKAO14965 403 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 GABBR2O75899 941 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 OPN1SWP03999 348 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 IST1P53990 364 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 SFSWAPQ12872 951 aaKnown RBP7.51□□□□□ -1.21
RIF1-201ENST00000243326 SYCE2Q6PIF2 218 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 C4orf19Q8IY42 314 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 TMEM74Q96NL1 305 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 INTS7Q9NVH2 962 aaKnown RBP7.51□□□□□ -1.21
RIF1-201ENST00000243326 ITGA11Q9UKX5 1188 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 PTGDR2Q9Y5Y4 395 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 FAM240BA0A1B0GVZ2 78 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 ADCYAP1R1P41586 468 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 POLR2JP52435 117 aaKnown RBP7.51□□□□□ -1.21
RIF1-201ENST00000243326 NAE1Q13564 534 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 KYAT1Q16773 422 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 TRAPPC5Q8IUR0 188 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 PTPN18Q99952 460 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 GSDMCQ9BYG8 508 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 TAS2R13Q9NYV9 303 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 AZIN1O14977 448 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 HCRTO43612 131 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 RASGRP1O95267 797 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 MT-CYBP00156 380 aaPredicted RBP7.51□□□□□ -1.21
RIF1-201ENST00000243326 SERPINA1P01009 418 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 HERC2P3Q9BVR0 1158 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 DPEP3Q9H4B8 488 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 MORF4L1Q9UBU8 362 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 EIF2B4Q9UI10 523 aaKnown RBP7.51□□□□□ -1.21
RIF1-201ENST00000243326 CEMIPQ8WUJ3 1361 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 OR6C70A6NIJ9 312 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 UGT8Q16880 541 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 GLYATQ6IB77 296 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 ERICH5Q6P6B1 374 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 SLC7A5P1Q8MH63 180 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 ASB8Q9H765 288 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 CSF2P04141 144 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 MLLT10P55197 1068 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 SLC25A24Q6NUK1 477 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 MOB2Q70IA6 237 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 CTU1Q7Z7A3 348 aaKnown RBP7.51□□□□□ -1.21
RIF1-201ENST00000243326 ZNF598Q86UK7 904 aaKnown RBP7.51□□□□□ -1.21
RIF1-201ENST00000243326 LRRC57Q8N9N7 239 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 TWIST2Q8WVJ9 160 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 SPACA7Q96KW9 195 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 TRIM62Q9BVG3 475 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 STON1Q9Y6Q2 735 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 PKDREJQ9NTG1 2253 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 ENPP3O14638 875 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 RGS10O43665 173 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 BRCC3P46736 316 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 CDC42P60953 191 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.51□□□□□ -1.21
RIF1-201ENST00000243326 NT5DC4Q86YG4 428 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 RAET1EQ8TD07 263 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 ZFP3Q96NJ6 502 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 ELL3Q9HB65 397 aaPredicted RBP7.51□□□□□ -1.21
RIF1-201ENST00000243326 PLK2Q9NYY3 685 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 ALOX15BO15296 676 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 SERPINF2P08697 491 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 GPR15P49685 360 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 SCNN1GP51170 649 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 BCAP31P51572 246 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 PPP4CP60510 307 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 GANABQ14697 944 aaKnown RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 NKD1Q969G9 470 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 FRMD8Q9BZ67 464 aaPredicted RBP7.5□□□□□ -1.21
RIF1-201ENST00000243326 TMEM114B3SHH9 223 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 NR2F1P10589 423 aa7.5□□□□□ -1.21
RIF1-201ENST00000243326 PTPN1P18031 435 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms