RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 TUBB1Q9H4B7 451 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 MID1IP1Q9NPA3 183 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 GPRC5DQ9NZD1 345 aa15.5■□□□□ 0.07
DDX55-201ENST00000238146 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.49■□□□□ 0.07
DDX55-201ENST00000238146 LRRC14BA6NHZ5 514 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 HHLA1C9JL84 531 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 B4GAT1O43505 415 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 MT-ND1P03886 318 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 MAP4P27816 1152 aaKnown RBP15.49■□□□□ 0.07
DDX55-201ENST00000238146 SOX11P35716 441 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 NFKB2Q00653 900 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 GEN1Q17RS7 908 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 GRAMD4Q6IC98 578 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 BLOC1S3Q6QNY0 202 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 TBPL2Q6SJ96 375 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 CILP2Q8IUL8 1156 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 DCP1BQ8IZD4 617 aaKnown RBP15.49■□□□□ 0.07
DDX55-201ENST00000238146 PAPD5Q8NDF8 572 aaKnown RBP15.49■□□□□ 0.07
DDX55-201ENST00000238146 OR52K2Q8NGK3 314 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 EXT2Q93063 718 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 NEURL2Q9BR09 285 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 ALG2Q9H553 416 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 ARMC7Q9H6L4 198 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 PALMDQ9NP74 551 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 NDFIP2Q9NV92 336 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 INTS10Q9NVR2 710 aaKnown RBP15.49■□□□□ 0.07
DDX55-201ENST00000238146 POLR3BQ9NW08 1133 aaPredicted RBP15.49■□□□□ 0.07
DDX55-201ENST00000238146 GNPTGQ9UJJ9 305 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 OAS3Q9Y6K5 1087 aaKnown RBP15.49■□□□□ 0.07
DDX55-201ENST00000238146 ZFC3H1O60293 1989 aaKnown RBP15.49■□□□□ 0.07
DDX55-201ENST00000238146 AZIN1O14977 448 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 NOL3O60936 208 aaKnown RBP15.49■□□□□ 0.07
DDX55-201ENST00000238146 SULT1C4O75897 302 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 HGFP14210 728 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 AXLP30530 894 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 TMBIM6P55061 237 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 WNT3AP56704 352 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 FOXM1Q08050 763 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 NCCRP1Q6ZVX7 275 aaPredicted RBP15.49■□□□□ 0.07
DDX55-201ENST00000238146 PTRH1Q86Y79 214 aaKnown RBP15.49■□□□□ 0.07
DDX55-201ENST00000238146 TBC1D21Q8IYX1 336 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 OR13J1Q8NGT2 312 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 PNPT1Q8TCS8 783 aaKnown RBP15.49■□□□□ 0.07
DDX55-201ENST00000238146 EMID1Q96A84 441 aaPredicted RBP15.49■□□□□ 0.07
DDX55-201ENST00000238146 TUBGCP3Q96CW5 907 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 KCNA7Q96RP8 456 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 SLC30A3Q99726 388 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 MROH8Q9H579 483 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 ELP3Q9H9T3 547 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 CACNG4Q9UBN1 327 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 ZNF639Q9UID6 485 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 ANAPC2Q9UJX6 822 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 SLC30A1Q9Y6M5 507 aa15.49■□□□□ 0.07
DDX55-201ENST00000238146 IQCA1LA6NCM1 817 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 BAIAP3O94812 1187 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 LDLRP01130 860 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 LBPP18428 481 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 ELK4P28324 431 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 GSTM4Q03013 218 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 RPS6KA2Q15349 733 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 SPATS1Q496A3 300 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 PYCR3Q53H96 274 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 COQ5Q5HYK3 327 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 ZNF773Q6PK81 442 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 PTGR2Q8N8N7 351 aaPredicted RBP15.48■□□□□ 0.07
DDX55-201ENST00000238146 TMEM40Q8WWA1 233 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 TRUB1Q8WWH5 349 aaKnown RBP15.48■□□□□ 0.07
DDX55-201ENST00000238146 TRIM54Q9BYV2 358 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 FANCEQ9HB96 536 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 H0Y858 1186 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 H3BMM5 538 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 CCL22O00626 93 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 DYNC1LI2O43237 492 aaPredicted RBP15.48■□□□□ 0.07
DDX55-201ENST00000238146 ADAM23O75077 832 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 MBL2P11226 248 aaPredicted RBP15.48■□□□□ 0.07
DDX55-201ENST00000238146 FUT4P22083 530 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 SLC26A3P40879 764 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 DIO3P55073 304 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 GNA12Q03113 381 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 KCNC4Q03721 635 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 LIPEQ05469 1076 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 NR1D2Q14995 579 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 UBXN11Q5T124 520 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 SMG8Q8ND04 991 aaKnown RBP15.48■□□□□ 0.07
DDX55-201ENST00000238146 DQX1Q8TE96 717 aaKnown RBP15.48■□□□□ 0.07
DDX55-201ENST00000238146 VPS33AQ96AX1 596 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 MUS81Q96NY9 551 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 NSUN5Q96P11 429 aaKnown RBP15.48■□□□□ 0.07
DDX55-201ENST00000238146 TLR9Q9NR96 1032 aa15.48■□□□□ 0.07
DDX55-201ENST00000238146 TIMM13Q9Y5L4 95 aaPredicted RBP15.48■□□□□ 0.07
DDX55-201ENST00000238146 ZNF236Q9UL36 1845 aa15.47■□□□□ 0.07
DDX55-201ENST00000238146 SEC14L2O76054 403 aa15.47■□□□□ 0.07
DDX55-201ENST00000238146 S1PR4O95977 384 aa15.47■□□□□ 0.07
DDX55-201ENST00000238146 LINC00032P0C843 101 aa15.47■□□□□ 0.07
DDX55-201ENST00000238146 JUNBP17275 347 aaPredicted RBP15.47■□□□□ 0.07
DDX55-201ENST00000238146 NFYCQ13952 458 aa15.47■□□□□ 0.07
DDX55-201ENST00000238146 KANK2Q63ZY3 851 aa15.47■□□□□ 0.07
DDX55-201ENST00000238146 KDELC1Q6UW63 502 aa15.47■□□□□ 0.07
DDX55-201ENST00000238146 SNX19Q92543 992 aa15.47■□□□□ 0.07
DDX55-201ENST00000238146 PPP1R2P1Q96PQ5 205 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms