RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CERS6Q6ZMG9 384 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 CDKN2AIPNLQ96HQ2 116 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 ABCG8Q9H221 673 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 SMYD2Q9NRG4 433 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 SUSD2Q9UGT4 822 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 GPSM3Q9Y4H4 160 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 HTRA2O43464 458 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 GABRG2P18507 467 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 RGS4P49798 205 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 CSE1LP55060 971 aaKnown RBP11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 INSCQ1MX18 579 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 GAB4Q2WGN9 574 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 DPPA4Q7L190 304 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 TSPAN33Q86UF1 283 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 PIGKQ92643 395 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 PANX3Q96QZ0 392 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 LATS2Q9NRM7 1088 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 NINJ2Q9NZG7 142 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 TSR3Q9UJK0 312 aaKnown RBP11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 NPIPB15A6NHN6 443 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 QSOX1O00391 747 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 S100BP04271 92 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 ILF2Q12905 390 aaKnown RBP11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 SIM2Q14190 667 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 NEK5Q6P3R8 708 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 TSSK4Q6SA08 328 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 PIH1D2Q8WWB5 315 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 SELENOSQ9BQE4 189 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 VPS11Q9H270 941 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 PPCSQ9HAB8 311 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 TRMT6Q9UJA5 497 aaKnown RBP11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 CRYL1Q9Y2S2 319 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 MYOFQ9NZM1 2061 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 MYO18AQ92614 2054 aaKnown RBP11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 ATG2BQ96BY7 2078 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 HMGCLP35914 325 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 DET1Q7L5Y6 550 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 RBFAQ8N0V3 343 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 KLHDC7BQ96G42 594 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 SLC39A10Q9ULF5 831 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 KCTD3Q9Y597 815 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 PSMD11O00231 422 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 CD160O95971 181 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 GOT2P00505 430 aaKnown RBP11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 PDGFBP01127 241 aaPredicted RBP11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 FMO4P31512 558 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 PTK2BQ14289 1009 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 GPR33Q49SQ1 333 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 UNC5AQ6ZN44 842 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 SNX20Q7Z614 316 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 DTWD2Q8NBA8 298 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 LMLNQ96KR4 655 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 NKIRAS1Q9NYS0 192 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 FBXO5Q9UKT4 447 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 PDZK1P1A8MUH7 402 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 H3BMM5 538 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 TSHRP16473 764 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 COL9A1P20849 921 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 NUDT1P36639 197 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 CHRNA6Q15825 494 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 LIPIQ6XZB0 460 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 TBC1D1Q86TI0 1168 aaPredicted RBP11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 TRIM48Q8IWZ4 208 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 SCAMP4Q969E2 229 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 SMC6Q96SB8 1091 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 TRIM54Q9BYV2 358 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 FADS3Q9Y5Q0 445 aa11.09□□□□□ -0.63
TNFAIP3-201ENST00000237289 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 RGSL1A5PLK6 1076 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 ADAM23O75077 832 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 CTSLP07711 333 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 FAM153BP0C7A2 387 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 CHRM1P11229 460 aaPredicted RBP11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 ITGB6P18564 788 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 GP5P40197 560 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 PTPN5P54829 565 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 FAM153CQ494X1 144 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 LDLRAP1Q5SW96 308 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 KIAA0930Q6ICG6 404 aaPredicted RBP11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 OTOAQ7RTW8 1153 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 TMC3Q7Z5M5 1100 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 TMEFF1Q8IYR6 380 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 NRSN1Q8IZ57 195 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 MPP5Q8N3R9 675 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 MDGA1Q8NFP4 955 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 TMEM159Q96B96 161 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 FAM136AQ96C01 138 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 HSPA12BQ96MM6 686 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 KDM4CQ9H3R0 1056 aa11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 STN1Q9H668 368 aaKnown RBP11.08□□□□□ -0.63
TNFAIP3-201ENST00000237289 CCDC162PA2VCL2 907 aa11.08□□□□□ -0.64
TNFAIP3-201ENST00000237289 FAM86C2PA6NEL3 165 aa11.08□□□□□ -0.64
TNFAIP3-201ENST00000237289 UGT1A9O60656 530 aa11.08□□□□□ -0.64
TNFAIP3-201ENST00000237289 UGT1A6P19224 532 aa11.08□□□□□ -0.64
TNFAIP3-201ENST00000237289 UGT1A1P22309 533 aa11.08□□□□□ -0.64
TNFAIP3-201ENST00000237289 UGT1A4P22310 534 aa11.08□□□□□ -0.64
TNFAIP3-201ENST00000237289 HNRNPA2B1P22626 353 aaKnown RBP11.08□□□□□ -0.64
TNFAIP3-201ENST00000237289 TNFRSF8P28908 595 aa11.08□□□□□ -0.64
TNFAIP3-201ENST00000237289 UGT1A3P35503 534 aa11.08□□□□□ -0.64
TNFAIP3-201ENST00000237289 UGT1A5P35504 534 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms