RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 TMEM121Q9BTD3 319 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 RIOK2Q9BVS4 552 aaKnown RBP13.69□□□□□ -0.22
VEGFA-201ENST00000230480 FRMD8Q9BZ67 464 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-201ENST00000230480 MAGEE1Q9HCI5 957 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 DNAJC28Q9NX36 388 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 KLHL8Q9P2G9 620 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-201ENST00000230480 SHOC2Q9UQ13 582 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 OAS3Q9Y6K5 1087 aaKnown RBP13.69□□□□□ -0.22
VEGFA-201ENST00000230480 UNC13CQ8NB66 2214 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 EPG5Q9HCE0 2579 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 ENC1O14682 589 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 ITGAVP06756 1048 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 FTH1P19P0C7X4 201 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 ETS1P14921 441 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 TSHRP16473 764 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 ZNF30P17039 623 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 JUNDP17535 347 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 CXCR5P32302 372 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 HK3P52790 923 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 CLDN6P56747 220 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 CDK3Q00526 305 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 SLC1A5Q15758 541 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 ENPP7Q6UWV6 458 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 ZNF765Q7L2R6 523 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 RAB44Q7Z6P3 723 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-201ENST00000230480 TRIM74Q86UV6 250 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 HEATR4Q86WZ0 1026 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 MARCH9Q86YJ5 346 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 CDKL3Q8IVW4 592 aaPredicted RBP13.68□□□□□ -0.22
VEGFA-201ENST00000230480 OR4C6Q8NH72 309 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 APOL2Q9BQE5 337 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 SLC17A4Q9Y2C5 497 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 ZNF711Q9Y462 761 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 PLEKHM1Q9Y4G2 1056 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 KCTD3Q9Y597 815 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 DGKBQ9Y6T7 804 aa13.68□□□□□ -0.22
VEGFA-201ENST00000230480 C1orf232A0A0U1RR37 186 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 FAM221BA6H8Z2 402 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 YY2O15391 372 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 YKT6O15498 198 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 TNFSF14O43557 240 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 BPIP17213 487 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 ACADVLP49748 655 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 EPHB1P54762 984 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 SRP54P61011 504 aaKnown RBP13.67□□□□□ -0.22
VEGFA-201ENST00000230480 MPP3Q13368 585 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 SPARCL1Q14515 664 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 SUZ12Q15022 739 aaKnown RBP13.67□□□□□ -0.22
VEGFA-201ENST00000230480 KHDC1Q4VXA5 237 aaKnown RBP13.67□□□□□ -0.22
VEGFA-201ENST00000230480 ADAMTSL4Q6UY14 1074 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 RAVER1Q8IY67 606 aaKnown RBP13.67□□□□□ -0.22
VEGFA-201ENST00000230480 SLC35F6Q8N357 371 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 RASGEF1CQ8N431 466 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 CHCHD4Q8N4Q1 142 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 SLC25A41Q8N5S1 370 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 PRELID2Q8N945 189 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 IPMKQ8NFU5 416 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 TRIM58Q8NG06 486 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 AP2M1Q96CW1 435 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 WDR92Q96MX6 357 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 C1QTNF7Q9BXJ2 289 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 SLC32A1Q9H598 525 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 TRMT1Q9NXH9 659 aaKnown RBP13.67□□□□□ -0.22
VEGFA-201ENST00000230480 SMARCAL1Q9NZC9 954 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 IL17CQ9P0M4 197 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 NFKBIL1Q9UBC1 381 aaPredicted RBP13.67□□□□□ -0.22
VEGFA-201ENST00000230480 RSPH14Q9UHP6 348 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 CSNK1G3Q9Y6M4 447 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 USP24Q9UPU5 2620 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 APC2O95996 2303 aa13.67□□□□□ -0.22
VEGFA-201ENST00000230480 FFAR2O15552 330 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 BUD23O43709 281 aaKnown RBP13.66□□□□□ -0.22
VEGFA-201ENST00000230480 HYAL3O43820 417 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-201ENST00000230480 USP12O75317 370 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 CAPNS1P04632 268 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 ATP1A1P05023 1023 aaKnown RBP13.66□□□□□ -0.22
VEGFA-201ENST00000230480 ZSCAN5DPP0CG00 497 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 MYCLP1P12525 358 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-201ENST00000230480 THOP1P52888 689 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 HNRNPKP61978 463 aaKnown RBP eCLIP13.66□□□□□ -0.228e-7■■■■□ 21.9
VEGFA-201ENST00000230480 SHC2P98077 582 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 PPARDQ03181 441 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 ARHGEF7Q14155 803 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 ZNF648Q5T619 568 aaPredicted RBP13.66□□□□□ -0.22
VEGFA-201ENST00000230480 FAXCQ5TGI0 409 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 CCDC181Q5TID7 509 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 NRSN1Q8IZ57 195 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 FAM181AQ8N9Y4 354 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 TTC13Q8NBP0 860 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 MYRIPQ8NFW9 859 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 OR56A4Q8NGH8 313 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 LMX1AQ8TE12 382 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 COG1Q8WTW3 980 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 ADAMTS14Q8WXS8 1223 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 MS4A14Q96JA4 679 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 CNDP2Q96KP4 475 aaKnown RBP13.66□□□□□ -0.22
VEGFA-201ENST00000230480 TBATAQ96M53 351 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 FICDQ9BVA6 458 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 BOCQ9BWV1 1114 aa13.66□□□□□ -0.22
VEGFA-201ENST00000230480 TMEM168Q9H0V1 697 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms