RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 NME5P56597 212 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 APOFQ13790 326 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 REP15Q6BDI9 236 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 CYHR1Q6ZMK1 362 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 PIWIL3Q7Z3Z3 882 aaKnown RBP9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 LINC00523Q86TU6 105 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 FIBCD1Q8N539 461 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 LZTR1Q8N653 840 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 ASB9Q96DX5 294 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 SLC45A3Q96JT2 553 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 GLOD4Q9HC38 313 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 ITM2CQ9NQX7 267 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 PLK2Q9NYY3 685 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 GIMAP2Q9UG22 337 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 AAR2Q9Y312 384 aaKnown RBP9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 TCAF1Q9Y4C2 921 aa9.4□□□□□ -0.9
HLA-DOA-201ENST00000229829 H3BMQ9 156 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 CCRL2O00421 344 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 UBFD1O14562 309 aaKnown RBP9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 DLGAP3O95886 979 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 F2P00734 622 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 CPB1P15086 417 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 LRPAP1P30533 357 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 SERPINB1P30740 379 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 SEPHS1P49903 392 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 BEX3Q00994 111 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 PMS2P3Q13401 168 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 FASTKQ14296 549 aaKnown RBP9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 RFTN1Q14699 578 aaPredicted RBP9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 SKIV2LQ15477 1246 aaKnown RBP9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 ZIK1Q3SY52 487 aaPredicted RBP9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 DCLRE1AQ6PJP8 1040 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 DSG4Q86SJ6 1040 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 ATPAF2Q8N5M1 289 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 TBC1D15Q8TC07 691 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 DLG3Q92796 817 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 MRGPRX2Q96LB1 330 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 COG8Q96MW5 612 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 COQ7Q99807 217 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 MRPL57Q9BQC6 102 aaKnown RBP9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 OSBPL11Q9BXB4 747 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 NSMCE4AQ9NXX6 385 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 MPP6Q9NZW5 540 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 RABL2AQ9UBK7 228 aaPredicted RBP9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 DSEQ9UL01 958 aa9.4□□□□□ -0.91
HLA-DOA-201ENST00000229829 FAM47E-STBD1D6RA91 191 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 PPP6CO00743 305 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 UBDO15205 165 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 NPHS1O60500 1241 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 HSPA1AP0DMV8 641 aaKnown RBP9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 HSPA1BP0DMV9 641 aaKnown RBP9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 CCNA2P20248 432 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 ATP5F1P24539 256 aaPredicted RBP9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 PRKAA2P54646 552 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 IKBKEQ14164 716 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 UGP2Q16851 508 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 TECRLQ5HYJ1 363 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 UBE2UQ5VVX9 321 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 HMBOX1Q6NT76 420 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 NEPROQ6NW34 567 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 PIWIL4Q7Z3Z4 852 aaKnown RBP9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 GPR142Q7Z601 462 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 CUZD1Q86UP6 607 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 IGFN1Q86VF2 1251 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 HERC6Q8IVU3 1022 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 CHERPQ8IWX8 916 aaKnown RBP9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 C2CD4AQ8NCU7 369 aaPredicted RBP9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 PPHLN1Q8NEY8 458 aaKnown RBP9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 HASPINQ8TF76 798 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 C3orf30Q96M34 536 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 FCRL5Q96RD9 977 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 TMEM209Q96SK2 561 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 ING2Q9H160 280 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 ABHD16BQ9H3Z7 469 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 HIPK3Q9H422 1215 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 TREX1Q9NSU2 369 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 TMLHEQ9NVH6 421 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 RBM22Q9NW64 420 aaKnown RBP eCLIP9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 PTGDR2Q9Y5Y4 395 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 TRPC5OSA6NMA1 111 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 H3BNH8 94 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 STK25O00506 426 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 TRIM24O15164 1050 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 CLOCKO15516 846 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 F9P00740 461 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 ADRA1AP35348 466 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 HK2P52789 917 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 SLC12A2P55011 1212 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 CDH13P55290 713 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 MAXP61244 160 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 CTBSQ01459 385 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 CLCQ05315 142 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 MFSD10Q14728 455 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 TMEM207Q6UWW9 146 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 CHSY3Q70JA7 882 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 TTC16Q8NEE8 873 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 MYLPFQ96A32 169 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 FBXL20Q96IG2 436 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 BIRC8Q96P09 236 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 RTP3Q9BQQ7 232 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms