RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 CERS6Q6ZMG9 384 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 OTOAQ7RTW8 1153 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 SPATA21Q7Z572 469 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 TBC1D1Q86TI0 1168 aaPredicted RBP16.75■□□□□ 0.27
TVP23C-201ENST00000225576 PIANPQ8IYJ0 282 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 ANKS4BQ8N8V4 417 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 TERB1Q8NA31 727 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 GRIN3AQ8TCU5 1115 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 KCTD4Q8WVF5 259 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 FGF14Q92915 247 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.75■□□□□ 0.27
TVP23C-201ENST00000225576 GPR78Q96P69 363 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 KXD1Q9BQD3 176 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 AARSD1Q9BTE6 412 aaKnown RBP16.75■□□□□ 0.27
TVP23C-201ENST00000225576 TSSK1BQ9BXA7 367 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 POMKQ9H5K3 350 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 POPDC3Q9HBV1 291 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 DKK3Q9UBP4 350 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 IL36AQ9UHA7 158 aa16.75■□□□□ 0.27
TVP23C-201ENST00000225576 USP15Q9Y4E8 981 aaPredicted RBP16.75■□□□□ 0.27
TVP23C-201ENST00000225576 KIF26AQ9ULI4 1882 aaPredicted RBP16.74■□□□□ 0.27
TVP23C-201ENST00000225576 TMEM265A0A087WTH1 108 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 SRP72O76094 671 aaKnown RBP16.74■□□□□ 0.27
TVP23C-201ENST00000225576 NFKBIAP25963 317 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 CDKN1CP49918 316 aaPredicted RBP16.74■□□□□ 0.27
TVP23C-201ENST00000225576 PGGT1BP53609 377 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 ADARP55265 1226 aaKnown RBP16.74■□□□□ 0.27
TVP23C-201ENST00000225576 CDKN2DP55273 166 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 KDSRQ06136 332 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 ZNF460Q14592 562 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 LRIT3Q3SXY7 679 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 PREPLQ4J6C6 727 aaPredicted RBP16.74■□□□□ 0.27
TVP23C-201ENST00000225576 ARSIQ5FYB1 569 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 MTSS1LQ765P7 747 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 STK40Q8N2I9 435 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 TMEM151AQ8N4L1 468 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 UCMAQ8WVF2 138 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 NXNL1Q96CM4 212 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 UBXN10Q96LJ8 280 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 NECTIN4Q96NY8 510 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 TRMT61BQ9BVS5 477 aaKnown RBP16.74■□□□□ 0.27
TVP23C-201ENST00000225576 GPAMQ9HCL2 828 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 GTSE1Q9NYZ3 720 aa16.74■□□□□ 0.27
TVP23C-201ENST00000225576 EDDM13A0A1B0GTR0 161 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 G3V2L1 256 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 GAPDHSO14556 408 aaPredicted RBP16.73■□□□□ 0.27
TVP23C-201ENST00000225576 CTSLP07711 333 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 BPIP17213 487 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 CD9P21926 228 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 SP100P23497 879 aaPredicted RBP16.73■□□□□ 0.27
TVP23C-201ENST00000225576 GDI1P31150 447 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 PPARGP37231 505 aaPredicted RBP16.73■□□□□ 0.27
TVP23C-201ENST00000225576 PTGER3P43115 390 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 BST1Q10588 318 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 DLG1Q12959 904 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 FAM83EQ2M2I3 478 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 HNRNPA1L2Q32P51 320 aaKnown RBP16.73■□□□□ 0.27
TVP23C-201ENST00000225576 ZNF805Q5CZA5 627 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 AGAP9Q5VTM2 703 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 ZDHHC20Q5W0Z9 365 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 LRRC66Q68CR7 880 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 LRRC8EQ6NSJ5 796 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 EP400NLQ6ZTU2 488 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 SNX20Q7Z614 316 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 TSPAN33Q86UF1 283 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 C7orf26Q96N11 449 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 CCDC68Q9H2F9 335 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 MTG2Q9H4K7 406 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 IL26Q9NPH9 171 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 IGSF5Q9NSI5 407 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 EPS15L1Q9UBC2 864 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 COMMD10Q9Y6G5 202 aa16.73■□□□□ 0.27
TVP23C-201ENST00000225576 LAMA2P24043 3122 aaKnown RBP16.73■□□□□ 0.27
TVP23C-201ENST00000225576 TRBV5-4A0A0C4DH59 114 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 UBA6A0AVT1 1052 aaPredicted RBP16.72■□□□□ 0.27
TVP23C-201ENST00000225576 TBC1D3BA6NDS4 549 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 TARM1B6A8C7 271 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 SNNO75324 88 aaPredicted RBP16.72■□□□□ 0.27
TVP23C-201ENST00000225576 TGDSO95455 350 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 LTA4HP09960 611 aaKnown RBP16.72■□□□□ 0.27
TVP23C-201ENST00000225576 FGF3P11487 239 aaPredicted RBP16.72■□□□□ 0.27
TVP23C-201ENST00000225576 CYP2A6P11509 494 aaPredicted RBP16.72■□□□□ 0.27
TVP23C-201ENST00000225576 ZNF30P17039 623 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 KCNA4P22459 653 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 GRK2P25098 689 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 SPAM1P38567 509 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 TIAL1Q01085 375 aaKnown RBP eCLIP16.72■□□□□ 0.278e-9■■■■□ 26.3
TVP23C-201ENST00000225576 PTSQ03393 145 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 STX3Q13277 289 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 ITPRIPL2Q3MIP1 535 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 GPR33Q49SQ1 333 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 FNDC3BQ53EP0 1204 aaKnown RBP16.72■□□□□ 0.27
TVP23C-201ENST00000225576 LYPLAL1Q5VWZ2 237 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 C6orf89Q6UWU4 347 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 TAS2R42Q7RTR8 314 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 C10orf107Q8IVU9 208 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 FSTL5Q8N475 847 aaPredicted RBP16.72■□□□□ 0.27
TVP23C-201ENST00000225576 SMRP1Q8NCR6 262 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 PPP1R14CQ8TAE6 165 aa16.72■□□□□ 0.27
TVP23C-201ENST00000225576 HEXDCQ8WVB3 486 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms