RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 HTR7P34969 479 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 CCR4P51679 360 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 DAOAP59103 153 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 PPM1JQ5JR12 505 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 SPANXN2Q5MJ10 180 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 KHDRBS2Q5VWX1 349 aaKnown RBP11.5□□□□□ -0.57
NOD1-201ENST00000222823 RFWD3Q6PCD5 774 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 SPOCK2Q92563 424 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 CLP1Q92989 425 aaKnown RBP11.5□□□□□ -0.57
NOD1-201ENST00000222823 NXNL1Q96CM4 212 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 SLC9A7Q96T83 725 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 ACAT2Q9BWD1 397 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 GBA3Q9H227 469 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 HBS1LQ9Y450 684 aaKnown RBP11.5□□□□□ -0.57
NOD1-201ENST00000222823 PNMA8CA0A1B0GUJ8 204 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 GCATO75600 419 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 SLC22A3O75751 556 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 SLC35G4P0C7Q5 338 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 TACR2P21452 398 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 LMO2P25791 158 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 NDUFV1P49821 464 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 USP46P62068 366 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 KIAA1324Q6UXG2 1013 aaKnown RBP11.5□□□□□ -0.57
NOD1-201ENST00000222823 KIAA0408Q6ZU52 694 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 TAC4Q86UU9 113 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 OFCC1Q8IZS5 231 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 BPIFB6Q8NFQ5 453 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 PCDH19Q8TAB3 1148 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 SYT17Q9BSW7 474 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 SLC25A51Q9H1U9 297 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 SSU72Q9NP77 194 aaKnown RBP11.5□□□□□ -0.57
NOD1-201ENST00000222823 TBC1D30Q9Y2I9 924 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 RAI2Q9Y5P3 530 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 MYH7BA7E2Y1 1941 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 MYH4Q9Y623 1939 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 PIPSLA2A3N6 862 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 MGRN1O60291 552 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 C22orf31O95567 290 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 UGT2B4P06133 528 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 MSX2P35548 267 aaPredicted RBP11.5□□□□□ -0.57
NOD1-201ENST00000222823 CXCR3P49682 368 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 LIMK2P53671 638 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 SULT2A1Q06520 285 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 GRM3Q14832 879 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 PDK3Q15120 406 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 TIMM50Q3ZCQ8 353 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 AAGABQ6PD74 315 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 BHLHB9Q6PI77 547 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 CERS6Q6ZMG9 384 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 SFRP1Q8N474 314 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 FITM2Q8N6M3 262 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 NAT16Q8N8M0 369 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 RBPJLQ9UBG7 517 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 ZNF180Q9UJW8 692 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 ZNF510Q9Y2H8 683 aa11.5□□□□□ -0.57
NOD1-201ENST00000222823 GSC2O15499 205 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 ERAL1O75616 437 aaKnown RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 PGM3O95394 542 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 AMD1P17707 334 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 DSC2Q02487 901 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 HNRNPDQ14103 355 aaKnown RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 ARL13AQ5H913 290 aaPredicted RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 METTL21CQ5VZV1 264 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 RGL4Q8IZJ4 473 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 ZNF655Q8N720 491 aaPredicted RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 NIPA2Q8N8Q9 360 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 TSPAN14Q8NG11 270 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 ASZ1Q8WWH4 475 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 LENG1Q96BZ8 264 aaPredicted RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 TIFAQ96CG3 184 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 AHCYL2Q96HN2 611 aaKnown RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 STRCQ7RTU9 1775 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 FOXO6A8MYZ6 492 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 LRATO95237 230 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 TGDSO95455 350 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 MAGEA10P43363 369 aaPredicted RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 DGUOKQ16854 277 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 RSBN1Q5VWQ0 802 aaPredicted RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 CDC73Q6P1J9 531 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 ECHDC2Q86YB7 292 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 STYXQ8WUJ0 223 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 C7orf26Q96N11 449 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 TSSK3Q96PN8 268 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 EVLQ9UI08 416 aaPredicted RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 STYXL1Q9Y6J8 313 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 DDX60LQ5H9U9 1706 aaKnown RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 ARL5CA6NH57 179 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 YJEFN3A6XGL0 299 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 H0Y858 1186 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 SEPT4O43236 478 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 TLL1O43897 1013 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 SNAP91O60641 907 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 CDK14O94921 469 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 MT-CYBP00156 380 aaPredicted RBP11.49□□□□□ -0.57
NOD1-201ENST00000222823 LAG3P18627 525 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 HTR1BP28222 390 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 GPD2P43304 727 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 GNA12Q03113 381 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 MAPK11Q15759 364 aa11.49□□□□□ -0.57
NOD1-201ENST00000222823 MPPE1Q53F39 396 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms