RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 CPOXP36551 454 aa29.6■■■□□ 2.33
PABPN1-201ENST00000216727 NAA25Q14CX7 972 aa29.6■■■□□ 2.33
PABPN1-201ENST00000216727 SETMARQ53H47 684 aaPredicted RBP29.6■■■□□ 2.33
PABPN1-201ENST00000216727 SH2D4BQ5SQS7 431 aa29.6■■■□□ 2.33
PABPN1-201ENST00000216727 TMEM240Q5SV17 173 aa29.6■■■□□ 2.33
PABPN1-201ENST00000216727 CAMK1DQ8IU85 385 aa29.6■■■□□ 2.33
PABPN1-201ENST00000216727 KIRREL3Q8IZU9 778 aa29.6■■■□□ 2.33
PABPN1-201ENST00000216727 PHTF2Q8N3S3 785 aa29.6■■■□□ 2.33
PABPN1-201ENST00000216727 SHKBP1Q8TBC3 707 aa29.6■■■□□ 2.33
PABPN1-201ENST00000216727 PHF21BQ96EK2 531 aa29.6■■■□□ 2.33
PABPN1-201ENST00000216727 SOCS5O75159 536 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 SMIM24O75264 130 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 TPBGLP0DKB5 382 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 EPHA3P29320 983 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 CDKN1CP49918 316 aaPredicted RBP29.59■■■□□ 2.33
PABPN1-201ENST00000216727 ADARP55265 1226 aaKnown RBP29.59■■■□□ 2.33
PABPN1-201ENST00000216727 PLPP4Q5VZY2 271 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 MAELQ96JY0 434 aaKnown RBP29.59■■■□□ 2.33
PABPN1-201ENST00000216727 DERL2Q9GZP9 239 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 RNPEPL1Q9HAU8 725 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 BPIFA1Q9NP55 256 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 HCFC1R1Q9NWW0 138 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 PRKAG2Q9UGJ0 569 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 INTS6Q9UL03 887 aaKnown RBP29.59■■■□□ 2.33
PABPN1-201ENST00000216727 OAS3Q9Y6K5 1087 aaKnown RBP29.59■■■□□ 2.33
PABPN1-201ENST00000216727 HELZP42694 1942 aaKnown RBP29.59■■■□□ 2.33
PABPN1-201ENST00000216727 GOLGA8QA0A0J9YX86 632 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 LCHNA4D1U4 455 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 GOLGA8OA6NCC3 632 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 GOLGA8NF8WBI6 632 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 SLC22A2O15244 555 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 HNRNPLP14866 589 aaKnown RBP eCLIP29.59■■■□□ 2.33
PABPN1-201ENST00000216727 CTNNB1P35222 781 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 XIAPP98170 497 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 SULT2A1Q06520 285 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 BCL2L1Q07817 233 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 KLF10Q13118 480 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 PTPRRQ15256 657 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 PTPRNQ16849 979 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 SMG9Q9H0W8 520 aaKnown RBP29.59■■■□□ 2.33
PABPN1-201ENST00000216727 GSTO2Q9H4Y5 243 aa29.59■■■□□ 2.33
PABPN1-201ENST00000216727 EVLQ9UI08 416 aaPredicted RBP29.59■■■□□ 2.33
PABPN1-201ENST00000216727 TM7SF2O76062 418 aa29.58■■■□□ 2.33
PABPN1-201ENST00000216727 HSPA8P11142 646 aaKnown RBP29.58■■■□□ 2.33
PABPN1-201ENST00000216727 ZNF678Q5SXM1 525 aa29.58■■■□□ 2.33
PABPN1-201ENST00000216727 PSRC1Q6PGN9 363 aaPredicted RBP29.58■■■□□ 2.33
PABPN1-201ENST00000216727 CMTM8Q8IZV2 173 aa29.58■■■□□ 2.33
PABPN1-201ENST00000216727 CPSF7Q8N684 471 aaKnown RBP29.58■■■□□ 2.33
PABPN1-201ENST00000216727 GPR63Q9BZJ6 419 aa29.58■■■□□ 2.33
PABPN1-201ENST00000216727 L3MBTL1Q9Y468 752 aa29.58■■■□□ 2.33
PABPN1-201ENST00000216727 COMMD10Q9Y6G5 202 aa29.58■■■□□ 2.33
PABPN1-201ENST00000216727 NEMP1O14524 444 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 ZNF821O75541 412 aaPredicted RBP29.57■■■□□ 2.32
PABPN1-201ENST00000216727 IGSF6O95976 241 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 PYGLP06737 847 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 PKMP14618 531 aaKnown RBP29.57■■■□□ 2.32
PABPN1-201ENST00000216727 ADSLP30566 484 aaPredicted RBP29.57■■■□□ 2.32
PABPN1-201ENST00000216727 ATP6V0D1P61421 351 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 MXRA7P84157 204 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 ZRANB3Q5FWF4 1079 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 PAQR3Q6TCH7 311 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 AFAP1L2Q8N4X5 818 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 KIAA1191Q96A73 305 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 EID2BQ96D98 161 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 ATOH8Q96SQ7 321 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 OSBPL1AQ9BXW6 950 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 GTSE1Q9NYZ3 720 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 FAM50BQ9Y247 325 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 GBF1Q92538 1859 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 H3BMM5 538 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 ENTPD5O75356 428 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 PRAMEF12O95522 483 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 JUNP05412 331 aaKnown RBP29.57■■■□□ 2.32
PABPN1-201ENST00000216727 HERVK_113P63132 956 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 SATB1Q01826 763 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 LYSMD3Q7Z3D4 306 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 CUZD1Q86UP6 607 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 POU5F2Q8N7G0 328 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 ENDOVQ8N8Q3 282 aaKnown RBP29.57■■■□□ 2.32
PABPN1-201ENST00000216727 SPPL3Q8TCT6 385 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 POF1BQ8WVV4 589 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 ERVK-6Q9BXR3 956 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 TLR9Q9NR96 1032 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 CCL26Q9Y258 94 aa29.57■■■□□ 2.32
PABPN1-201ENST00000216727 A0A0J9YYE9 177 aa29.56■■■□□ 2.32
PABPN1-201ENST00000216727 TLL1O43897 1013 aa29.56■■■□□ 2.32
PABPN1-201ENST00000216727 TRBC1P01850 177 aa29.56■■■□□ 2.32
PABPN1-201ENST00000216727 LMNAP02545 664 aaKnown RBP29.56■■■□□ 2.32
PABPN1-201ENST00000216727 PTPN2P17706 415 aa29.56■■■□□ 2.32
PABPN1-201ENST00000216727 PTGER3P43115 390 aa29.56■■■□□ 2.32
PABPN1-201ENST00000216727 CACNG1Q06432 222 aa29.56■■■□□ 2.32
PABPN1-201ENST00000216727 RAD51Q06609 339 aa29.56■■■□□ 2.32
PABPN1-201ENST00000216727 OR4D1Q15615 310 aa29.56■■■□□ 2.32
PABPN1-201ENST00000216727 PDCD2Q16342 344 aaPredicted RBP29.56■■■□□ 2.32
PABPN1-201ENST00000216727 RYBPQ8N488 228 aaPredicted RBP29.56■■■□□ 2.32
PABPN1-201ENST00000216727 OR6K2Q8NGY2 324 aa29.56■■■□□ 2.32
PABPN1-201ENST00000216727 PHOSPHO2Q8TCD6 241 aa29.56■■■□□ 2.32
PABPN1-201ENST00000216727 ZNF385DQ9H6B1 395 aa29.56■■■□□ 2.32
PABPN1-201ENST00000216727 ATP13A3Q9H7F0 1226 aa29.56■■■□□ 2.32
PABPN1-201ENST00000216727 SOBPA7XYQ1 873 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms