RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 RUNX3Q13761 415 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 ADCY4Q8NFM4 1077 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 OR52K2Q8NGK3 314 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 SGSM3Q96HU1 749 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 HHIPQ96QV1 700 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 RHBDL2Q9NX52 303 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 CASRP41180 1078 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 PKNOX1P55347 436 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 PIK3R6Q5UE93 754 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 THAP11Q96EK4 314 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 PHACTR1Q9C0D0 580 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 C12orf65Q9H3J6 166 aaKnown RBP13.72□□□□□ -0.21
SIX4-201ENST00000216513 APOBEC3GQ9HC16 384 aaKnown RBP13.72□□□□□ -0.21
SIX4-201ENST00000216513 SYBUQ9NX95 663 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 ADAMTS3O15072 1205 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 HLA-DQA2P01906 255 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 SIM2Q14190 667 aaPredicted RBP13.72□□□□□ -0.21
SIX4-201ENST00000216513 FAM187BQ17R55 369 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 C16orf62Q7Z3J2 963 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 DNAJC9Q8WXX5 260 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 PCYT2Q99447 389 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 AIF1LQ9BQI0 150 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 HERC2P3Q9BVR0 1158 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 SUV39H2Q9H5I1 410 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 COMMD8Q9NX08 183 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 EME2A4GXA9 379 aaPredicted RBP13.72□□□□□ -0.21
SIX4-201ENST00000216513 CCL22O00626 93 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 RIPK2O43353 540 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 CTSAP10619 480 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 RASA2Q15283 850 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 ACTRT1Q8TDG2 376 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 SIK3Q9Y2K2 1263 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 KLHL2O95198 593 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 FYNP06241 537 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 DMWDQ09019 674 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 CPSF6Q16630 551 aaKnown RBP eCLIP13.72□□□□□ -0.21
SIX4-201ENST00000216513 UPP1Q16831 310 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 CHSY3Q70JA7 882 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 SLC26A9Q7LBE3 791 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 AMZ2Q86W34 360 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 OSTM1Q86WC4 334 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 ZFP28Q8NHY6 868 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 KCNS3Q9BQ31 491 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 HEBP2Q9Y5Z4 205 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 A0A1W2PP55 124 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 CLDN4O14493 209 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 GPR32O75388 356 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 HNRNPCP07910 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
SIX4-201ENST00000216513 LTA4HP09960 611 aaKnown RBP13.71□□□□□ -0.21
SIX4-201ENST00000216513 KCNE1P15382 129 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 MIIPQ5JXC2 388 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 CERCAMQ5T4B2 595 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 PLEKHM3Q6ZWE6 761 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 HEATR4Q86WZ0 1026 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 FBXW11Q9UKB1 542 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 RTP2Q5QGT7 225 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 CYB5D1Q6P9G0 228 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 GRAMD1AQ96CP6 724 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 MTO1Q9Y2Z2 717 aaKnown RBP13.71□□□□□ -0.21
SIX4-201ENST00000216513 LRRC37A3O60309 1634 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 TTC24A2A3L6 582 aaPredicted RBP13.71□□□□□ -0.21
SIX4-201ENST00000216513 KAT7O95251 611 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 NTRK1P04629 796 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 SCTRP47872 440 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 NDST2P52849 883 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 LRRC69Q6ZNQ3 347 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 PTGR2Q8N8N7 351 aaPredicted RBP13.71□□□□□ -0.21
SIX4-201ENST00000216513 RHBDD1Q8TEB9 315 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 DTNBP1Q96EV8 351 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 AARSD1Q9BTE6 412 aaKnown RBP13.71□□□□□ -0.21
SIX4-201ENST00000216513 SPHK2Q9NRA0 654 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 CCDC167Q9P0B6 97 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 ANKRD6Q9Y2G4 727 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 CHD4Q14839 1912 aa13.71□□□□□ -0.21
SIX4-201ENST00000216513 NT5EP21589 574 aa13.71□□□□□ -0.22
SIX4-201ENST00000216513 MSX2P35548 267 aaPredicted RBP13.71□□□□□ -0.22
SIX4-201ENST00000216513 SLC1A6P48664 564 aa13.71□□□□□ -0.22
SIX4-201ENST00000216513 CACNG1Q06432 222 aa13.71□□□□□ -0.22
SIX4-201ENST00000216513 RIOK2Q9BVS4 552 aaKnown RBP13.71□□□□□ -0.22
SIX4-201ENST00000216513 POLR1BQ9H9Y6 1135 aa13.71□□□□□ -0.22
SIX4-201ENST00000216513 RPP40O75818 363 aaKnown RBP13.71□□□□□ -0.22
SIX4-201ENST00000216513 RPL22P35268 128 aaKnown RBP13.71□□□□□ -0.22
SIX4-201ENST00000216513 CAMK1DQ8IU85 385 aa13.71□□□□□ -0.22
SIX4-201ENST00000216513 DEFB107AQ8IZN7 70 aa13.71□□□□□ -0.22
SIX4-201ENST00000216513 ZBTB2Q8N680 514 aa13.71□□□□□ -0.22
SIX4-201ENST00000216513 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.71□□□□□ -0.22
SIX4-201ENST00000216513 SPPL2AQ8TCT8 520 aa13.71□□□□□ -0.22
SIX4-201ENST00000216513 NMD3Q96D46 503 aaKnown RBP13.71□□□□□ -0.22
SIX4-201ENST00000216513 CMTM5Q96DZ9 223 aa13.71□□□□□ -0.22
SIX4-201ENST00000216513 DCBLD2Q96PD2 775 aa13.71□□□□□ -0.22
SIX4-201ENST00000216513 FBXW2Q9UKT8 454 aa13.71□□□□□ -0.22
SIX4-201ENST00000216513 CFAP20Q9Y6A4 193 aaKnown RBP13.71□□□□□ -0.22
SIX4-201ENST00000216513 CFAP73A6NFT4 308 aa13.7□□□□□ -0.22
SIX4-201ENST00000216513 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.7□□□□□ -0.22
SIX4-201ENST00000216513 RGS5O15539 181 aa13.7□□□□□ -0.22
SIX4-201ENST00000216513 TYRP1P17643 537 aa13.7□□□□□ -0.22
SIX4-201ENST00000216513 ADSSP30520 456 aa13.7□□□□□ -0.22
SIX4-201ENST00000216513 IGFALSP35858 605 aa13.7□□□□□ -0.22
SIX4-201ENST00000216513 SYPL2Q5VXT5 272 aa13.7□□□□□ -0.22
SIX4-201ENST00000216513 SPATA22Q8NHS9 363 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms