RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 PDE2AO00408 941 aaPredicted RBP22.05■■□□□ 1.12
VTI1B-201ENST00000216456 INPP4BO15327 924 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 CLDN7O95471 211 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 ECEL1O95672 775 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 SLC5A2P31639 672 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 ADCY8P40145 1251 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 TMPRSS3P57727 454 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 ZBTB17Q13105 803 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 IFI16Q16666 785 aaKnown RBP22.05■■□□□ 1.12
VTI1B-201ENST00000216456 ZFYVE27Q5T4F4 411 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 BROXQ5VW32 411 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 ALG1LQ6GMV1 187 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 USP53Q70EK8 1073 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 JAMLQ86YT9 394 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 LPCAT1Q8NF37 534 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 IQCDQ96DY2 449 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 DNAJC7Q99615 494 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 RIOK2Q9BVS4 552 aaKnown RBP22.05■■□□□ 1.12
VTI1B-201ENST00000216456 BRD8Q9H0E9 1235 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 UVRAGQ9P2Y5 699 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 PRKAB1Q9Y478 270 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 LOXL2Q9Y4K0 774 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 HYOU1Q9Y4L1 999 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.05■■□□□ 1.125e-7■■□□□ 12.2
VTI1B-201ENST00000216456 TEX51A0A1B0GUA7 166 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 JCHAINP01591 159 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 MMP2P08253 660 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 ITGA2BP08514 1039 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 KRT10P13645 584 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 KDELR1P24390 212 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 CCNCP24863 283 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 ALDH4A1P30038 563 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 STC1P52823 247 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 EPHB1P54762 984 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 ZFP36L1Q07352 338 aaKnown RBP22.04■■□□□ 1.12
VTI1B-201ENST00000216456 PDK2Q15119 407 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 KIAA1614Q5VZ46 1190 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 NPNTQ6UXI9 565 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 C17orf82Q86X59 251 aaPredicted RBP22.04■■□□□ 1.12
VTI1B-201ENST00000216456 NAGSQ8N159 534 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 PLD5Q8N7P1 536 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 CNTD1Q8N815 330 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 CCNYQ8ND76 341 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 OR6C4Q8NGE1 309 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 TSGA13Q96PP4 275 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 WDR24Q96S15 920 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 NUDT22Q9BRQ3 303 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 GSDMCQ9BYG8 508 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 DPH1Q9BZG8 443 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 SSUH2Q9Y2M2 353 aa22.04■■□□□ 1.12
VTI1B-201ENST00000216456 GCN1Q92616 2671 aaKnown RBP22.03■■□□□ 1.12
VTI1B-201ENST00000216456 TRBV23OR9-2A0A075B6M9 112 aa22.03■■□□□ 1.12
VTI1B-201ENST00000216456 CAPN8A6NHC0 703 aa22.03■■□□□ 1.12
VTI1B-201ENST00000216456 EFSO43281 561 aa22.03■■□□□ 1.12
VTI1B-201ENST00000216456 NUDT21O43809 227 aaKnown RBP22.03■■□□□ 1.12
VTI1B-201ENST00000216456 CCKBRP32239 447 aa22.03■■□□□ 1.12
VTI1B-201ENST00000216456 CD86P42081 329 aa22.03■■□□□ 1.12
VTI1B-201ENST00000216456 DPTQ07507 201 aa22.03■■□□□ 1.12
VTI1B-201ENST00000216456 ILF3Q12906 894 aaKnown RBP eCLIP22.03■■□□□ 1.12
VTI1B-201ENST00000216456 NKAIN2Q5VXU1 208 aa22.03■■□□□ 1.12
VTI1B-201ENST00000216456 TIGD7Q6NT04 549 aaPredicted RBP22.03■■□□□ 1.12
VTI1B-201ENST00000216456 ZNF761Q86XN6 746 aaPredicted RBP22.03■■□□□ 1.12
VTI1B-201ENST00000216456 LRRC49Q8IUZ0 686 aa22.03■■□□□ 1.12
VTI1B-201ENST00000216456 SLITRK4Q8IW52 837 aa22.03■■□□□ 1.12
VTI1B-201ENST00000216456 RNF214Q8ND24 703 aa22.03■■□□□ 1.12
VTI1B-201ENST00000216456 OR8K1Q8NGG5 319 aa22.03■■□□□ 1.12
VTI1B-201ENST00000216456 SLC35G2Q8TBE7 412 aa22.03■■□□□ 1.12
VTI1B-201ENST00000216456 RNF157Q96PX1 679 aa22.03■■□□□ 1.12
VTI1B-201ENST00000216456 SEMA4CQ9C0C4 833 aa22.03■■□□□ 1.12
VTI1B-201ENST00000216456 TRNAU1APQ9NX07 287 aaKnown RBP22.03■■□□□ 1.12
VTI1B-201ENST00000216456 OAS3Q9Y6K5 1087 aaKnown RBP22.03■■□□□ 1.12
VTI1B-201ENST00000216456 LRRD1A4D1F6 860 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 C3orf70A6NLC5 250 aaPredicted RBP22.02■■□□□ 1.12
VTI1B-201ENST00000216456 PPM1DO15297 605 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 EML2O95834 649 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 ATP1A1P05023 1023 aaKnown RBP22.02■■□□□ 1.12
VTI1B-201ENST00000216456 IVLP07476 585 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 KRT7P08729 469 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 TMEM253P0C7T8 217 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 ACTR1BP42025 376 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 ACTR1AP61163 376 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 C16orf72Q14CZ0 275 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 TSR1Q2NL82 804 aaKnown RBP22.02■■□□□ 1.12
VTI1B-201ENST00000216456 PHF19Q5T6S3 580 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 ADAMTSL4Q6UY14 1074 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 ZNF574Q6ZN55 896 aaPredicted RBP22.02■■□□□ 1.12
VTI1B-201ENST00000216456 CCDC13Q8IYE1 715 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 RCBTB1Q8NDN9 531 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 KIAA1524Q8TCG1 905 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 TMEM74Q96NL1 305 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 STRADBQ9C0K7 418 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 DEF6Q9H4E7 631 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 PCDH9Q9HC56 1237 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 HEY1Q9Y5J3 304 aa22.02■■□□□ 1.12
VTI1B-201ENST00000216456 CFAP46Q8IYW2 2715 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 AKR1B10O60218 316 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 TNNT1P13805 278 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 PNLIPP16233 465 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 MPSTP25325 297 aa22.01■■□□□ 1.11
VTI1B-201ENST00000216456 NFKBIAP25963 317 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms