RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 USH1CQ9Y6N9 552 aa19.64■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ANKRD12Q6UB98 2062 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ATG2BQ96BY7 2078 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CLDN7O95471 211 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 LAMP2P13473 410 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 XIAPP98170 497 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ZNF549Q6P9A3 640 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 KCTD4Q8WVF5 259 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 FGF14Q92915 247 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 KXD1Q9BQD3 176 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 PRO3102Q9H379 93 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 MTG2Q9H4K7 406 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 INTS10Q9NVR2 710 aaKnown RBP19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 COPG2Q9UBF2 871 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 SLC8A2Q9UPR5 921 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 VWA7Q9Y334 891 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 WASF2Q9Y6W5 498 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 COL6A2P12110 1019 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CES4AQ5XG92 561 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 NAIF1Q69YI7 327 aaPredicted RBP19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 GRAMD4Q6IC98 578 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CHRDL2Q6WN34 429 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 EP400NLQ6ZTU2 488 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ASRGL1Q7L266 308 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TSPAN33Q86UF1 283 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 LCA5Q86VQ0 697 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ZNF366Q8N895 744 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 SCG3Q8WXD2 468 aaKnown RBP19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 MCCC1Q96RQ3 725 aaPredicted RBP19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 NMRAL1Q9HBL8 299 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CLDND1Q9NY35 253 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 LMCD1Q9NZU5 365 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 PLXNB3Q9ULL4 1909 aa19.63■□□□□ 0.73
TNFRSF1A-201ENST00000162749 A8MX80 341 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 GPR39O43194 453 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 NQO1P15559 274 aaKnown RBP19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 PSMC3P17980 439 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 KCNA4P22459 653 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 LTBRP36941 435 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CDKN2DP55273 166 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CHI3L2Q15782 390 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 PARM1Q6UWI2 310 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 GDPD4Q6W3E5 623 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 SPNS2Q8IVW8 549 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 LPGAT1Q92604 370 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 KLHL32Q96NJ5 620 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TCF12Q99081 682 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 HEPHQ9BQS7 1158 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TSSK1BQ9BXA7 367 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CORO1CQ9ULV4 474 aaPredicted RBP19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TRIM33Q9UPN9 1127 aa19.62■□□□□ 0.73
TNFRSF1A-201ENST00000162749 LEFTY1O75610 366 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 SEMG2Q02383 582 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 KDSRQ06136 332 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 BST1Q10588 318 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 DLG1Q12959 904 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 RUNX3Q13761 415 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 DBN1Q16643 649 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 FAM45BPQ6NSW5 357 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 USP45Q70EL2 814 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TMEM151AQ8N4L1 468 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 KIF2BQ8N4N8 673 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 FAM45AQ8TCE6 357 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TSPAN17Q96FV3 270 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 GPR78Q96P69 363 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 C19orf43Q9BQ61 176 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 POMKQ9H5K3 350 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 FAM96AQ9H5X1 160 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ARHGEF3Q9NR81 526 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 PLA2G4CQ9UP65 541 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TICRRQ7Z2Z1 1910 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TK2O00142 265 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 KLHL2O95198 593 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CTSLP07711 333 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ALDH3A1P30838 453 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 GJA4P35212 333 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 GLRBP48167 497 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ILF2Q12905 390 aaKnown RBP19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ZRANB3Q5FWF4 1079 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CRTC1Q6UUV9 634 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TPRG1Q6ZUI0 275 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 SFTPA1Q8IWL2 248 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TRIM42Q8IWZ5 723 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 PHTF2Q8N3S3 785 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 SPATA6LQ8N4H0 392 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 CPA6Q8N4T0 437 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TTC8Q8TAM2 541 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 RAB3IL1Q8TBN0 382 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ELSPBP1Q96BH3 223 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 KLHL29Q96CT2 875 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 ERP27Q96DN0 273 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 BRD9Q9H8M2 597 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 GPAMQ9HCL2 828 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 NPHS2Q9NP85 383 aa19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 MTF2Q9Y483 593 aaPredicted RBP19.61■□□□□ 0.73
TNFRSF1A-201ENST00000162749 A0A087X1B8 175 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 GAPDHSO14556 408 aaPredicted RBP19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 UNC5CO95185 931 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 OPRD1P41143 372 aa19.6■□□□□ 0.73
TNFRSF1A-201ENST00000162749 TTPAP49638 278 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms