RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 VTI1BQ9UEU0 232 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 SRRDQ9UH36 339 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 RAB26Q9ULW5 256 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 SPO11Q9Y5K1 396 aa13.12□□□□□ -0.31
CTNS-201ENST00000046640 SLC38A8A6NNN8 435 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 TMEM189-UBE2V1I3L0A0 370 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 UBXN8O00124 270 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 INPPL1O15357 1258 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 GPC4O75487 556 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 GALK1P51570 392 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 ATN1P54259 1190 aaPredicted RBP13.11□□□□□ -0.31
CTNS-201ENST00000046640 PFKPQ01813 784 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 MRPL58Q14197 206 aaKnown RBP13.11□□□□□ -0.31
CTNS-201ENST00000046640 PABPC1LQ4VXU2 614 aaKnown RBP13.11□□□□□ -0.31
CTNS-201ENST00000046640 KIAA0408Q6ZU52 694 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 TEX26Q8N6G2 289 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 EFHBQ8N7U6 833 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 WBP2Q969T9 261 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 ESAMQ96AP7 390 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 UBXN10Q96LJ8 280 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 KCNA7Q96RP8 456 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 TMEM79Q9BSE2 394 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 TRIM8Q9BZR9 551 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 DOCK4Q8N1I0 1966 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 LOC285095A0A1B0GVY8 99 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 DRGXA6NNA5 263 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 H3BMM5 538 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 PLOD2O00469 737 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 SLC7A4O43246 635 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 PRAMEF11O60813 436 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 PQBP1O60828 265 aaKnown RBP13.11□□□□□ -0.31
CTNS-201ENST00000046640 TIPRLO75663 272 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 INHAP05111 366 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 GALTP07902 379 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 SERPINF2P08697 491 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 MAGEA11P43364 429 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 FAM117BQ6P1L5 589 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 CCDC117Q8IWD4 279 aaPredicted RBP13.11□□□□□ -0.31
CTNS-201ENST00000046640 OR4K2Q8NGD2 314 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 SNRNP27Q8WVK2 155 aaKnown RBP13.11□□□□□ -0.31
CTNS-201ENST00000046640 LPGAT1Q92604 370 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 CNDP1Q96KN2 507 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 C3orf30Q96M34 536 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 PPP1R2P1Q96PQ5 205 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 MRPS26Q9BYN8 205 aaKnown RBP13.11□□□□□ -0.31
CTNS-201ENST00000046640 MFSD1Q9H3U5 465 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 EPS15L1Q9UBC2 864 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 AP4S1Q9Y587 144 aa13.11□□□□□ -0.31
CTNS-201ENST00000046640 OR6C75A6NL08 312 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 GOLGA8CPA6NN73 597 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 ZNF839A8K0R7 811 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 MAGEB3O15480 346 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 NPHS1O60500 1241 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 BCAS2O75934 225 aaPredicted RBP13.1□□□□□ -0.31
CTNS-201ENST00000046640 KLKB1P03952 638 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 BMP1P13497 986 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 SELPP16109 830 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 ATP5C1P36542 298 aaKnown RBP13.1□□□□□ -0.31
CTNS-201ENST00000046640 KPNA2P52292 529 aaKnown RBP13.1□□□□□ -0.31
CTNS-201ENST00000046640 GNA12Q03113 381 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 PARP15Q460N3 678 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 LHX8Q68G74 356 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 TRIM74Q86UV6 250 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 TRIM73Q86UV7 250 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 PTGR2Q8N8N7 351 aaPredicted RBP13.1□□□□□ -0.31
CTNS-201ENST00000046640 TMEM102Q8N9M5 508 aaPredicted RBP13.1□□□□□ -0.31
CTNS-201ENST00000046640 ADCY4Q8NFM4 1077 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 TSPAN17Q96FV3 270 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 TRAF6Q9Y4K3 522 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 FAM149AA5PLN7 773 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 SAC3D1A6NKF1 404 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 TRPC5OSA6NMA1 111 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 SLCO1B7G3V0H7 640 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 ACOT8O14734 319 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 UBDO15205 165 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 FOXD2O60548 495 aaPredicted RBP13.1□□□□□ -0.31
CTNS-201ENST00000046640 RBP1P09455 135 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 UGT1A6P19224 532 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 PAX3P23760 479 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 SLC5A2P31639 672 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 FOXA1P55317 472 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 ACAP2Q15057 778 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 OR4D1Q15615 310 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 KRT80Q6KB66 452 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 ZFP1Q6P2D0 407 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 DCBLD1Q8N8Z6 715 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 FBXO22Q8NEZ5 403 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 LPCAT1Q8NF37 534 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 OR4L1Q8NH43 312 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 HMGCLL1Q8TB92 370 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 TTPALQ9BTX7 342 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 OLA1Q9NTK5 396 aaKnown RBP13.1□□□□□ -0.31
CTNS-201ENST00000046640 PTTG2Q9NZH5 202 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 IL37Q9NZH6 218 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 GALPQ9UBC7 116 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 AURKCQ9UQB9 309 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 RNF11Q9Y3C5 154 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 SQORQ9Y6N5 450 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 A0A1B0GTL3 188 aa13.1□□□□□ -0.31
CTNS-201ENST00000046640 PRSS51A0A1B0GVH4 220 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms