RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 SRFBP1Q8NEF9 429 aaKnown RBP23.12■■□□□ 1.29
TARBP1-201ENST00000040877 MPP4Q96JB8 637 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 TMEM109Q9BVC6 243 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 NUDT4Q9NZJ9 180 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 GTF2IRD1Q9UHL9 959 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 FBXW11Q9UKB1 542 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 GSTK1Q9Y2Q3 226 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 PTGES3LE9PB15 166 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 HMGB3O15347 200 aaKnown RBP23.12■■□□□ 1.29
TARBP1-201ENST00000040877 LINC00032P0C843 101 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 IDSP22304 550 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 GSTM5P46439 218 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 GSSP48637 474 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 NEDD8Q15843 81 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 AAGABQ6PD74 315 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 ZCCHC7Q8N3Z6 543 aaKnown RBP23.12■■□□□ 1.29
TARBP1-201ENST00000040877 TFAP2BQ92481 460 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 CCDC28BQ9BUN5 200 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 ZDHHC4Q9NPG8 344 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 PRDM8Q9NQV8 689 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 PLK2Q9NYY3 685 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 CACNA1FO60840 1977 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 DHX15O43143 795 aaKnown RBP23.12■■□□□ 1.29
TARBP1-201ENST00000040877 TRIQKQ629K1 86 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 TPGS2Q68CL5 300 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 PHF10Q8WUB8 498 aaKnown RBP23.12■■□□□ 1.29
TARBP1-201ENST00000040877 FAM192AQ9GZU8 254 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 FAM83DQ9H4H8 585 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 SSU72Q9NP77 194 aaKnown RBP23.12■■□□□ 1.29
TARBP1-201ENST00000040877 ATP6V1HQ9UI12 483 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 MAGEL2Q9UJ55 1249 aa23.12■■□□□ 1.29
TARBP1-201ENST00000040877 LIMK2P53671 638 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 MAGEE2Q8TD90 523 aaPredicted RBP23.11■■□□□ 1.29
TARBP1-201ENST00000040877 CAB39LQ9H9S4 337 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 APOBEC3GQ9HC16 384 aaKnown RBP23.11■■□□□ 1.29
TARBP1-201ENST00000040877 INSIG1O15503 277 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 TSPAN8P19075 237 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 ASMTP46597 345 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 C21orf59P57076 290 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 NPY5RQ15761 445 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.11■■□□□ 1.29
TARBP1-201ENST00000040877 RCN3Q96D15 328 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 DPEP3Q9H4B8 488 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 POLR1BQ9H9Y6 1135 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 AP3D1O14617 1153 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 CLVS1Q8IUQ0 354 aaPredicted RBP23.11■■□□□ 1.29
TARBP1-201ENST00000040877 RTKNQ9BST9 563 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 MYBPHLA2RUH7 354 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 GNPDA1P46926 289 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 RAB14P61106 215 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 PRKCZQ05513 592 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 PDZK1Q5T2W1 519 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 ADGRD1Q6QNK2 874 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 GET4Q7L5D6 327 aaPredicted RBP23.11■■□□□ 1.29
TARBP1-201ENST00000040877 SPATA6LQ8N4H0 392 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 CCDC185Q8N715 623 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 SLC22A17Q8WUG5 538 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 FANCEQ9HB96 536 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 SEMA3GQ9NS98 782 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 CLN6Q9NWW5 311 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 ETAA1Q9NY74 926 aa23.11■■□□□ 1.29
TARBP1-201ENST00000040877 ERAL1O75616 437 aaKnown RBP23.1■■□□□ 1.29
TARBP1-201ENST00000040877 CCNA2P20248 432 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 IDH2P48735 452 aaKnown RBP23.1■■□□□ 1.29
TARBP1-201ENST00000040877 C16orf72Q14CZ0 275 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 TTC27Q6P3X3 843 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 GAS2L1Q99501 681 aaPredicted RBP23.1■■□□□ 1.29
TARBP1-201ENST00000040877 C1orf50Q9BV19 199 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 CLIC5Q9NZA1 410 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 FZD10Q9ULW2 581 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 RBM47A0AV96 593 aaKnown RBP23.1■■□□□ 1.29
TARBP1-201ENST00000040877 H0Y858 1186 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 NFKBIEO00221 500 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 STK16O75716 305 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 METTL21CQ5VZV1 264 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 KLHL23Q8NBE8 558 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 SLC38A8A6NNN8 435 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 RFTN1Q14699 578 aaPredicted RBP23.1■■□□□ 1.29
TARBP1-201ENST00000040877 RFWD3Q6PCD5 774 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 SCIMPQ6UWF3 145 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 OTOP2Q7RTS6 562 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 BNIPLQ7Z465 357 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 DHDDSQ86SQ9 333 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 ZNF567Q8N184 647 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 RPRD1BQ9NQG5 326 aaKnown RBP23.1■■□□□ 1.29
TARBP1-201ENST00000040877 IMP3Q9NV31 184 aaKnown RBP23.1■■□□□ 1.29
TARBP1-201ENST00000040877 ZFP37Q9Y6Q3 630 aaPredicted RBP23.1■■□□□ 1.29
TARBP1-201ENST00000040877 HNF4AP41235 474 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 ASPAP45381 313 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 CDH13P55290 713 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 SPANXN2Q5MJ10 180 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 ARMC8Q8IUR7 673 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 NDRG1Q92597 394 aaKnown RBP23.1■■□□□ 1.29
TARBP1-201ENST00000040877 C7orf26Q96N11 449 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 SLCO1B3Q9NPD5 702 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 CHRAC1Q9NRG0 131 aa23.1■■□□□ 1.29
TARBP1-201ENST00000040877 AFDNP55196 1824 aaKnown RBP23.1■■□□□ 1.29
TARBP1-201ENST00000040877 ACLYP53396 1101 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 PNLIPRP1P54315 467 aa23.09■■□□□ 1.29
TARBP1-201ENST00000040877 DSC2Q02487 901 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms