RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 VPS45Q9NRW7 570 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 CPA4Q9UI42 421 aa14.01□□□□□ -0.17
USH1C-201ENST00000005226 NCF1BA6NI72 391 aaPredicted RBP14□□□□□ -0.17
USH1C-201ENST00000005226 NCF1CA8MVU1 366 aaPredicted RBP14□□□□□ -0.17
USH1C-201ENST00000005226 NCF1P14598 390 aaPredicted RBP14□□□□□ -0.17
USH1C-201ENST00000005226 ELK4P28324 431 aa14□□□□□ -0.17
USH1C-201ENST00000005226 PRDX3P30048 256 aaKnown RBP14□□□□□ -0.17
USH1C-201ENST00000005226 LHX1P48742 406 aa14□□□□□ -0.17
USH1C-201ENST00000005226 GSK3BP49841 420 aa14□□□□□ -0.17
USH1C-201ENST00000005226 ATP6V0D1P61421 351 aa14□□□□□ -0.17
USH1C-201ENST00000005226 SDHAF4Q5VUM1 108 aa14□□□□□ -0.17
USH1C-201ENST00000005226 PATL1Q86TB9 770 aaKnown RBP14□□□□□ -0.17
USH1C-201ENST00000005226 PHYKPLQ8IUZ5 450 aa14□□□□□ -0.17
USH1C-201ENST00000005226 NPLOC4Q8TAT6 608 aa14□□□□□ -0.17
USH1C-201ENST00000005226 TANKQ92844 425 aa14□□□□□ -0.17
USH1C-201ENST00000005226 CENPNQ96H22 339 aaPredicted RBP14□□□□□ -0.17
USH1C-201ENST00000005226 MYRFLQ96LU7 910 aa14□□□□□ -0.17
USH1C-201ENST00000005226 C1orf50Q9BV19 199 aa14□□□□□ -0.17
USH1C-201ENST00000005226 TMEM165Q9HC07 324 aa14□□□□□ -0.17
USH1C-201ENST00000005226 POLG2Q9UHN1 485 aa14□□□□□ -0.17
USH1C-201ENST00000005226 IKZF3Q9UKT9 509 aa14□□□□□ -0.17
USH1C-201ENST00000005226 F8W810 466 aa14□□□□□ -0.17
USH1C-201ENST00000005226 IRAK2O43187 625 aa14□□□□□ -0.17
USH1C-201ENST00000005226 GFAPP14136 432 aa14□□□□□ -0.17
USH1C-201ENST00000005226 CD1DP15813 335 aa14□□□□□ -0.17
USH1C-201ENST00000005226 ZNF182P17025 639 aaPredicted RBP14□□□□□ -0.17
USH1C-201ENST00000005226 AXLP30530 894 aa14□□□□□ -0.17
USH1C-201ENST00000005226 NFYCQ13952 458 aa14□□□□□ -0.17
USH1C-201ENST00000005226 MFSD10Q14728 455 aa14□□□□□ -0.17
USH1C-201ENST00000005226 POLD3Q15054 466 aaPredicted RBP14□□□□□ -0.17
USH1C-201ENST00000005226 INTS11Q5TA45 600 aaKnown RBP14□□□□□ -0.17
USH1C-201ENST00000005226 DHRS4L2Q6PKH6 230 aa14□□□□□ -0.17
USH1C-201ENST00000005226 KIAA0408Q6ZU52 694 aa14□□□□□ -0.17
USH1C-201ENST00000005226 RALGPS2Q86X27 583 aaPredicted RBP14□□□□□ -0.17
USH1C-201ENST00000005226 TRPV3Q8NET8 790 aa14□□□□□ -0.17
USH1C-201ENST00000005226 LZICQ8WZA0 190 aa14□□□□□ -0.17
USH1C-201ENST00000005226 TSPAN17Q96FV3 270 aa14□□□□□ -0.17
USH1C-201ENST00000005226 MAML3Q96JK9 1138 aa14□□□□□ -0.17
USH1C-201ENST00000005226 PLEKHG4BQ96PX9 1271 aa14□□□□□ -0.17
USH1C-201ENST00000005226 MRM3Q9HC36 420 aaKnown RBP14□□□□□ -0.17
USH1C-201ENST00000005226 FAIMQ9NVQ4 179 aa14□□□□□ -0.17
USH1C-201ENST00000005226 ABCD2Q9UBJ2 740 aa14□□□□□ -0.17
USH1C-201ENST00000005226 HS3ST4Q9Y661 456 aa14□□□□□ -0.17
USH1C-201ENST00000005226 MBLAC1A4D2B0 266 aaPredicted RBP13.99□□□□□ -0.17
USH1C-201ENST00000005226 ASPDHA6ND91 283 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 AQP12BA6NM10 295 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 E9PAM4 449 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 CNTN5O94779 1100 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 IMPDH2P12268 514 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 MTHFD2P13995 350 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 NR4A1P22736 598 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 LIPEQ05469 1076 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 CYBRD1Q53TN4 286 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 AQP12AQ8IXF9 295 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 DHRSXQ8N5I4 330 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 TBC1D15Q8TC07 691 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 PTCD2Q8WV60 388 aaKnown RBP13.99□□□□□ -0.17
USH1C-201ENST00000005226 TMEM125Q96AQ2 219 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 ERLEC1Q96DZ1 483 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 L3HYPDHQ96EM0 354 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 ACOX2Q99424 681 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 HOPXQ9BPY8 73 aaPredicted RBP13.99□□□□□ -0.17
USH1C-201ENST00000005226 C9orf16Q9BUW7 83 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 PRKD2Q9BZL6 878 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 ARMC7Q9H6L4 198 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 NMUR1Q9HB89 426 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 ACTR3BQ9P1U1 418 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 ARL5AQ9Y689 179 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 SCN4AP35499 1836 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 ENPP3O14638 875 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 ZNF189O75820 626 aaPredicted RBP13.99□□□□□ -0.17
USH1C-201ENST00000005226 PEX11BO96011 259 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 PCNAP12004 261 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 MATN1P21941 496 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 UFM1P61960 85 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 TRAF2Q12933 501 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 SIRPB2Q5JXA9 342 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 TMEM214Q6NUQ4 689 aaKnown RBP13.99□□□□□ -0.17
USH1C-201ENST00000005226 MINDY1Q8N5J2 469 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 BLOC1S5Q8TDH9 187 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 HMCESQ96FZ2 354 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 TINF2Q9BSI4 451 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 CATSPERBQ9H7T0 1116 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 SLC38A7Q9NVC3 462 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 INTS7Q9NVH2 962 aaKnown RBP13.99□□□□□ -0.17
USH1C-201ENST00000005226 CDH9Q9ULB4 789 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 PCDHA9Q9Y5H5 950 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 NYNRINQ9P2P1 1898 aaKnown RBP13.99□□□□□ -0.17
USH1C-201ENST00000005226 TRIM64CA6NLI5 447 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 KCNH1O95259 989 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 RASAL1O95294 804 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 ZBTB11O95625 1053 aaPredicted RBP13.99□□□□□ -0.17
USH1C-201ENST00000005226 POMCP01189 267 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 THP07101 528 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 MMP2P08253 660 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 MYL3P08590 195 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 OR4Q2P0C623 313 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 UGT1A1P22309 533 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 UGT1A4P22310 534 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 EEF1B2P24534 225 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms