RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Spag4Q9JJF2 443 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Myh15E9Q264 1925 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Gm6337K7N6X9 211 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Gm3115L7N285 211 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Hoxc6P10629 235 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 SnnP61807 88 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 MslnlQ8C160 685 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Plekhh3Q8VCE9 796 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Gemin6Q9CX53 166 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Clec2gQ9D676 269 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Myh11O08638 1972 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Vmn2r7E9PYL5 915 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Vmn2r3H3BJ88 915 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Vmn2r6H3BK29 913 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Crhr1P35347 415 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 MafbP54841 323 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 AnpepP97449 966 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Siah1bQ06985 282 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 MtdhQ80WJ7 579 aaKnown RBP18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Smarcal1Q8BJL0 910 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Aldh4a1Q8CHT0 562 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Gsto2Q8K2Q2 248 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 FopnlQ9CZS3 174 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Fbxl20Q9CZV8 436 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Tmem80Q9D3H0 123 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Stk32bQ9JJX8 414 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Nt5cQ9JM14 200 aa18.84■□□□□ 0.61
Upf1-201ENSMUST00000075666 Sh3pxd2aO89032 1124 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 BcheQ03311 603 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Znf185Q62394 352 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Ca4Q64444 305 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Trmt2bQ8BQJ6 493 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Impg1Q8R1W8 798 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Unc93b1Q8VCW4 598 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Me2Q99KE1 589 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Slc24a3Q99PD7 645 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Mrps17Q9CQE3 120 aaKnown RBP18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Oxct1Q9D0K2 520 aaKnown RBP18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Cntd1Q9D995 334 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Il18rapQ9Z2B1 614 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 IqccA2ADZ8 418 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 GabreA2AMW3 916 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Top6blJ3QMY9 579 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Mpzl3Q3V3F6 237 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Slc8a2Q8K596 921 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Idh3bQ91VA7 384 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Pcdhga10Q91XY9 930 aa18.83■□□□□ 0.61
Upf1-201ENSMUST00000075666 Zmynd12A2BGJ5 363 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Sdc4O35988 198 aaKnown RBP18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Hipk1O88904 1210 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Agtr2P35374 363 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Tarbp2P97473 365 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Elf3Q3UPW2 391 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Coq9Q8K1Z0 313 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Spns2Q91VM4 549 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Fam45aQ9D8N2 357 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Vmn2r73D3Z7M3 851 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Gm3278L7N2D2 218 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Tnfsf4P43488 198 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Copz1P61924 177 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Gja5Q01231 358 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Tnfaip8l3Q3TBL6 204 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Fam198bQ3UPI1 517 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Zfp560Q3URI6 754 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 BC030870Q3V2G4 71 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Ddx5Q61656 614 aaKnown RBP18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Arel1Q8CHG5 823 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Setd7Q8VHL1 366 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Sytl2Q99N50 950 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Acsl4Q9QUJ7 711 aa18.83■□□□□ 0.6
Upf1-201ENSMUST00000075666 Per3O70361 1113 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Tgfb2P27090 414 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 2700097O09RikQ6PGK3 301 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Slc46a2Q8CA03 479 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Ndufa5Q9CPP6 116 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Bace2Q9JL18 514 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Kif28pD3YXS5 1028 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Kctd18E0CZ26 429 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Vmn2r38G3UYA8 861 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Slc9a3G3X939 829 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Vmn2r33K7N705 861 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Gm2888K7N746 267 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Ncam1P13595 1115 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Nomo1Q6GQT9 1214 aaKnown RBP18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 B3gnt7Q8K0J2 397 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Gprc6aQ8K4Z6 928 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Arhgef25Q9CWR0 618 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Nrxn3Q6P9K9 1571 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Arl6O88848 186 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Gon7P0C8B4 98 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 YwhaqP68254 245 aaKnown RBP18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 SirpaP97797 513 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Slc6a3Q61327 619 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Thoc7Q7TMY4 204 aaKnown RBP18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Tspan9Q8BJU2 239 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Pcyox1lQ8C7K6 495 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Ints10Q8K2A7 710 aaKnown RBP18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Fis1Q9CQ92 152 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Isl2Q9CXV0 359 aa18.82■□□□□ 0.6
Upf1-201ENSMUST00000075666 Syde1Q9DBZ9 737 aa18.82■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms