RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Acsl5Q8JZR0 683 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Rpl17Q9CPR4 184 aaKnown RBP16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Mmp19Q9JHI0 527 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Cyhr1Q9QXA1 311 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Ism1A2ATD1 454 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Xpnpep3B7ZMP1 506 aaKnown RBP16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Sema6aO35464 1031 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Ap3d1O54774 1199 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Sept4P28661 478 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Slc2a3P32037 493 aaKnown RBP16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Impdh1P50096 514 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Adra1dP97714 562 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 DbhQ64237 622 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Nup93Q8BJ71 819 aaKnown RBP16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Mtrf1lQ8BJU9 373 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Frs2Q8C180 508 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Slc46a2Q8CA03 479 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Olfr348Q8VGK3 313 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Pip4k2cQ91XU3 421 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Prrt4B2RU40 902 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Ppef1O35655 650 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 ArsaP50428 506 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Ndst2P52850 883 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Ntrk1Q3UFB7 799 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Tmem102Q3UPR7 509 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Olfr847Q8VFF4 312 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 TmlheQ91ZE0 421 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Nck1Q99M51 377 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 RecqlQ9Z129 648 aa16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 VarsQ9Z1Q9 1263 aaKnown RBP16■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Ttll9A2APC3 461 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Gm3526E9PZM0 191 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 GzmkO35205 263 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Hspa4lP48722 838 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Parp3Q3ULW8 533 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Pacs2Q3V3Q7 862 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Gm5800Q497L3 186 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 TsnQ62348 228 aaKnown RBP15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Ces2bQ6PDB7 556 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Trit1Q80UN9 467 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Spata7Q80VP2 582 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Snx32Q80ZJ7 404 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Fam72aQ8BFZ8 149 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Pnpla8Q8K1N1 776 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Pitrm1Q8K411 1036 aaKnown RBP15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Slc30a5Q8R4H9 761 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Fam192aQ91WE2 254 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 DcxrQ91X52 244 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Slc35b2Q91ZN5 431 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Lrrc40Q9CRC8 602 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Rab13Q9DD03 202 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Ndst3Q9EQH7 873 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Dbn1Q9QXS6 706 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Il17aQ62386 158 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Sec24bQ80ZX0 1251 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Pcdh20Q8BIZ0 952 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Acsm2Q8K0L3 575 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 BsndQ8VIM4 307 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Prkag2Q91WG5 566 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Pgm3Q9CYR6 542 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Abcb9Q9JJ59 762 aa15.99■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Zmynd12A2BGJ5 363 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Ssxb6A2BI74 170 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 JhyE9Q793 770 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Ephx2P34914 554 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Gli1P47806 1111 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Ltbp3Q61810 1268 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Q8CDN1 933 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 RhoqQ8R527 205 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Olfr665Q8VG79 316 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Olfr273Q8VG87 317 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Tor1bQ9ER41 336 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Pik3cgQ9JHG7 1102 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Racgap1Q9WVM1 628 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Gm43518A0A0G2JGB6 165 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Mcf2A2AEU1 1111 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Eif2b3B1AUN2 452 aaKnown RBP15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Kif6E9PX57 802 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Nsmce4aG3XA30 381 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Vmn2r57L7N269 863 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Vmn2r61L7N2B8 865 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Sdc4O35988 198 aaKnown RBP15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Traf2P39429 501 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Ikzf1Q03267 517 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Tmem255bQ5FW56 369 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Nfe2l2Q60795 597 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Rpp38Q80UU2 280 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Znf668Q8K2R5 619 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Kcnc4Q8R1C0 628 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Pcdhga10Q91XY9 930 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Dnaaf1Q9D2H9 634 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Stk19Q9JHN8 254 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Cyb561d2Q9WUE3 222 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Pappa2E9PZ87 1789 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Gm13941A2AJ38 245 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Csf3rP40223 837 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Cdh5P55284 784 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Cyp2c37P56654 490 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Smpdl3aP70158 445 aa15.98■□□□□ 0.15
Ckap4-201ENSMUST00000053871 Sox17Q61473 419 aa15.98■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms