RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Mup11P04938 181 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Htr5bP31387 370 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Ap1s1P61967 158 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cyp2j13Q3UNV4 503 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Foxr1Q3UTB7 268 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gm21320Q4FZE8 181 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Eif2b4Q61749 524 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gdpd5Q640M6 607 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cep78Q6IRU7 790 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Q6PAC4 1279 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Fnip2Q80TD3 1108 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 IfneQ80ZF2 192 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Fem1cQ8CEF1 617 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Vmn1r79Q8R285 306 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 KlbQ99N32 1043 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Kcne2Q9D808 123 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Mcemp1Q9D8U6 183 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Hmg20aQ9DC33 346 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Fam209A2APA5 170 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Olfr1049A2ARZ0 308 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gm14459A2BI73 179 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Fpr-rs4A4FUQ5 323 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Aldoart1A6ZI46 419 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Zfp651E9PZ11 729 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Olfr694K7N641 315 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Vmn2r31L7N1Z4 861 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cyp27b1O35084 507 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 ItgavP43406 1044 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Mxd1P50538 227 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Fubp3Q3TIX6 575 aaKnown RBP10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Marveld2Q3UZP0 555 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 BC030870Q3V2G4 71 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Xkr9Q5GH62 373 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gm11487Q5RIS0 354 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Rap1gap2Q5SVL6 712 aaKnown RBP10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Snx31Q6P8Y7 439 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Smarcal1Q8BJL0 910 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Vps26bQ8C0E2 336 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 NeproQ8R2U2 564 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Adgrf1Q8VEC3 908 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Vps4aQ8VEJ9 437 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Pcdhgb2Q91XX7 928 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Tas1r2Q925I4 843 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Rsl24d1Q99L28 163 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cldn22Q9D7U6 220 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cdh13Q9WTR5 714 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Zfp811A0A0J9YU71 552 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gm13089A2AGW7 455 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 PiggD3Z3Y1 983 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Polr2jO08740 117 aaKnown RBP10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Slc22a2O70577 553 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Q3TYS2 187 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Fam129aQ3UW53 926 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Nr1h4Q60641 488 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Kcna4Q61423 654 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Olfr1355Q7TQU9 310 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Rhbdf2Q80WQ6 827 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Zfyve1Q810J8 777 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Stk32aQ8BGW6 398 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Ckap4Q8BMK4 575 aaKnown RBP10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Barhl2Q8VIB5 384 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Npffr2Q924H0 417 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cdkn2aipnlQ9D211 116 aaKnown RBP10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Syde1Q9DBZ9 737 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Panx1Q9JIP4 426 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Dnaja2Q9QYJ0 412 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Thsd7aQ69ZU6 1645 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Scn4aQ9ER60 1841 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Sult2a7A0A1B0GRF0 313 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Tex28B1AYN9 409 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Adamts14E9PX39 1209 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gm3138K7N754 218 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Prkag1O54950 330 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gnpda1O88958 289 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Chrna1P04756 457 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cd2P08920 344 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Lrpap1P55302 360 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Rpl26P61255 145 aaKnown RBP10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 AcadsQ07417 412 aaKnown RBP10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Echdc2Q3TLP5 296 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Q5EBG8 199 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 CapslQ6P8Y1 208 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cfap206Q6PE87 622 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Pcdh20Q8BIZ0 952 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Clec1aQ8BWY2 269 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Slco2b1Q8BXB6 683 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Lca5lQ8C0X0 741 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Wdr26Q8C6G8 641 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gsto2Q8K2Q2 248 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cnot6Q8K3P5 557 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Tomm70Q9CZW5 611 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Pou5f2Q9DAC9 329 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Stk25Q9Z2W1 426 aa10.28□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Znfx1Q8R151 1909 aaKnown RBP10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Olfr742A2RTP5 311 aa10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Hmox2O70252 315 aa10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Fzd1O70421 642 aa10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Slc26a1P58735 704 aa10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Kir3dl1P83555 432 aa10.27□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Naa11Q3UX61 218 aa10.27□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms