RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Sfrp1Q8C4U3 314 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Nkiras1Q8CEC5 192 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Mrpl47Q8K2Y7 252 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Gprc5bQ923Z0 410 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 St7Q99M96 577 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Tmem114Q9D563 222 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Rgs1Q9JL25 209 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Myo16Q5DU14 1919 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Znf106O88466 1888 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Gm28168A0A087WNP1 180 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Gm6509A0A0J9YUV1 481 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Gm3259D3YUK0 475 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Cyp2b23E9Q593 491 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Gm7535F7CXE4 302 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Gm6351K9J7D1 481 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Atn1O35126 1175 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 AldoaP05064 364 aaKnown RBP10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Agtr2P35374 363 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Cdh5P55284 784 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Hoxb13P70321 286 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Hdgfl2Q3UMU9 669 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 MyrfQ3UR85 1138 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Afg1lQ3V384 480 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 RasefQ5RI75 627 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Arcn1Q5XJY5 511 aaKnown RBP10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Itih1Q61702 907 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 RadilQ69Z89 1099 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Gm7247Q6UY52 187 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Rslcan18Q7M6X5 460 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Olfr798Q7TRH8 311 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Wwp1Q8BZZ3 918 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Olfr807Q8VGI9 311 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Cdhr1Q8VHP6 859 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Tcaf2Q921K8 919 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Mccc1Q99MR8 717 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 S100a14Q9D2Q8 104 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Mmp19Q9JHI0 527 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Il20Q9JKV9 176 aa10.68□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Esp31A8R0W3 114 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Ankle1A8VU90 534 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Vmn2r74E9PW21 853 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Gm21833J3QPK1 500 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Pbx3O35317 434 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Tgm2P21981 686 aaKnown RBP10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Ephx2P34914 554 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 MatkP41242 505 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Gp1bbP56400 206 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Cyp2c39P56656 490 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Traf6P70196 530 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 WasP70315 520 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 XpaQ64267 272 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Q6GQU0 248 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Kirrel2Q7TSU7 700 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Tspan9Q8BJU2 239 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Prkaa2Q8BRK8 552 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Znf385bQ8BXJ8 482 aaKnown RBP10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Ctxn3Q8BXZ0 80 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 DrgxQ8BYH0 263 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 H2-Q4Q8HWB2 354 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Traf3ip2Q8N7N6 555 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Gsg1Q8R1W2 324 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Ddx50Q99MJ9 734 aaKnown RBP10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Ddx28Q9CWT6 540 aaKnown RBP10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Atad1Q9D5T0 361 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Tex47Q9D5W8 253 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Borcs5Q9D920 195 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Cldn19Q9ET38 224 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Nt5cQ9JM14 200 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 PtprfA2A8L5 1898 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Gm43951A0A0N4SUT6 962 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Gm21964A0A1W2P7S4 437 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Grin3aA2AIR5 1135 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Herc6F2Z461 1003 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Rhox2gL7MUB9 191 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 OmdO35103 423 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 MycP01108 439 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Tial1P70318 392 aaKnown RBP10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Pnpla1Q3V1D5 599 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 KrtdapQ3V2T4 102 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Skiv2lQ6NZR5 1244 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Slc36a3Q811P0 477 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Dlgap2Q8BJ42 1059 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 StgQ8BM15 349 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Hspa13Q8BM72 471 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Nup54Q8BTS4 510 aaKnown RBP10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Fbxo48Q8CAT8 161 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Spdye4bQ8CDE8 236 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Slc47a1Q8K0H1 567 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 ClmpQ8R373 373 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Olfr1494Q8VGP8 315 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Satb2Q8VI24 733 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Gemin2Q9CQQ4 269 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Mgrn1Q9D074 532 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Prpsap1Q9D0M1 356 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 CinpQ9D0V8 212 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Rnft1Q9DCN7 395 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Paqr5Q9DCU0 330 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 MkksQ9JI70 570 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Cngb3Q9JJZ9 694 aa10.67□□□□□ -0.7
Ptcd1-201ENSMUST00000031628 Pias4Q9JM05 507 aa10.67□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms