RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Fubp3Q3TIX6 575 aaKnown RBP18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Rmnd5bQ91YQ7 393 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Ggt7Q99JP7 662 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Cyb561d2Q9WUE3 222 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Aldoart1A6ZI46 419 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Azin1O35484 448 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 PolP11369 1281 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Dlx2P40764 332 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 CtscP97821 462 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Uba1Q02053 1058 aaKnown RBP18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Nol9Q3TZX8 714 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 MelkQ61846 643 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Olfr667Q7TRP4 326 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 B3gnt5Q8BGY6 376 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Noc4lQ8BHY2 516 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 B430218F22RikQ8BQR5 223 aa18.71■□□□□ 0.59
Shkbp1-201ENSMUST00000003857 Kif26aQ52KG5 1881 aa18.71■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Arrdc4A0A0B4J1F4 415 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Vmn2r120E9PX34 856 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Spaca6E9Q8Q8 339 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Olfr726E9Q8X3 321 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 CcnoP0C242 352 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 LmnaP48678 665 aaKnown RBP18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Olfr725Q05A45 321 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Colec11Q3SXB8 272 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 UrgcpQ5NCI0 926 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Tfap2cQ61312 449 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Znf423Q80TS5 1292 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Serpina3bQ8BYY9 420 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Vps26bQ8C0E2 336 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 TiparpQ8C1B2 657 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Tmem259Q8CIV2 574 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Cyp2c50Q91X77 490 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Atoh8Q99NA2 322 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Kif19Q99PT9 997 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 LrgukQ9D5S7 820 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Mpp6Q9JLB0 553 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Gm45861A0A1B0GRY3 1923 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Gm6133B2RY53 190 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 1600015I10RikE9Q745 711 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Rb1P13405 921 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Hspa4lP48722 838 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Ybx1P62960 322 aaKnown RBP18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Eif4ebp2P70445 120 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Echdc2Q3TLP5 296 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Gm7247Q6UY52 187 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Pnma8aQ80VM8 430 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Arl5aQ80ZU0 179 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Atxn7l2Q8C8K6 696 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Gbp5Q8CFB4 590 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Sirt3Q8R104 334 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Rsl24d1Q99L28 163 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Ubqln5Q9D4I8 510 aa18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 NvlQ9DBY8 855 aaKnown RBP18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Noa1Q9JJG9 693 aaKnown RBP18.7■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Zscan4eA0A1B0GRE8 505 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Igf2bp1O88477 577 aaKnown RBP18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Gp1bbP56400 206 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 YwhahP68510 246 aaKnown RBP18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 AxlQ00993 888 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Flot2Q60634 428 aaKnown RBP18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Eps15l1Q60902 907 aaKnown RBP18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Actr3bQ641P0 418 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Otud6aQ6IE21 290 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Dclk2Q6PGN3 756 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Hmgxb4Q80Y32 594 aaKnown RBP18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Lrrc8dQ8BGR2 859 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 ThtpaQ8JZL3 224 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Tspan33Q8R3S2 283 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Sec16bQ91XT4 1051 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Wfdc1Q9ESH5 211 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Il22bQ9JJY8 179 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Atg2aQ6P4T0 1914 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 RlfA2A7F4 1918 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Lcn6A2AJB9 181 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Inpp5aE9QAS7 422 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Ncam2O35136 837 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 BhmtO35490 407 aaKnown RBP18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Ephx2P34914 554 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 St14P56677 855 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Pim3P58750 326 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Tuba4aP68368 448 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 HpcaP84075 193 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Sephs2P97364 452 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 SbplQ3TUY3 232 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Uimc1Q5U5Q9 727 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Ddx4Q61496 702 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Letm2Q7TNU7 480 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Barhl2Q8VIB5 384 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Tor1bQ9ER41 336 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Pcm1Q9R0L6 2025 aa18.69■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Plxna4Q80UG2 1893 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Olfr839-ps1A0A1D5RMH6 312 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 IsxA1A546 240 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Ccdc120A2AEV7 629 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Pate1E9Q658 125 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Calhm3J3QMI4 347 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Hs3st1O35310 311 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Sema6aO35464 1031 aa18.68■□□□□ 0.58
Shkbp1-201ENSMUST00000003857 Tdpoz3Q717B4 365 aa18.68■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms