RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 TRIM62Q9BVG3 475 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 EML4Q9HC35 981 aaKnown RBP16.82■□□□□ 0.28
PHGDH-223ENST00000641597 SEMA4BQ9NPR2 832 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-223ENST00000641597 PCDHB8Q9UN66 801 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 CCDC160A6NGH7 325 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 VILLO15195 856 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 CLPTM1O96005 669 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 CAPN3P20807 821 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 ATP6V1B2P21281 511 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 KPNA2P52292 529 aaKnown RBP16.82■□□□□ 0.28
PHGDH-223ENST00000641597 NDST2P52849 883 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 SLC14A2Q15849 920 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 SLC5A9Q2M3M2 681 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 MFN1Q8IWA4 741 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 FBXO32Q969P5 355 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 GPR62Q9BZJ7 368 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 SPAG4Q9NPE6 437 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 MAP10Q9P2G4 905 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 RNF11Q9Y3C5 154 aa16.82■□□□□ 0.28
PHGDH-223ENST00000641597 LOC285095A0A1B0GVY8 99 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 WASH4PA8MWX3 477 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 GRIA3P42263 894 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 HERVK_113P63132 956 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 SATB1Q01826 763 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 STX5Q13190 355 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 MSANTD2Q6P1R3 559 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 ADCY4Q8NFM4 1077 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 CANT1Q8WVQ1 401 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 SLC30A3Q99726 388 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 ERVK-6Q9BXR3 956 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 MED16Q9Y2X0 877 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 ENPP3O14638 875 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 ZNF37AP17032 561 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-223ENST00000641597 TYMPP19971 482 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 GPX3P22352 226 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 DNAJB1P25685 340 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 FMO4P31512 558 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 AGTR2P50052 363 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 DIO3P55073 304 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 SERINC3Q13530 473 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 IRF5Q13568 498 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 MYLK3Q32MK0 819 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 SETMARQ53H47 684 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-223ENST00000641597 FAM171A1Q5VUB5 890 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 PAQR3Q6TCH7 311 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 SOCS4Q8WXH5 440 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 TSPAN17Q96FV3 270 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 TEX37Q96LM6 180 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 RANBP9Q96S59 729 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 CD300AQ9UGN4 299 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 ASB1Q9Y576 335 aa16.81■□□□□ 0.28
PHGDH-223ENST00000641597 A0A0J9YYE9 177 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 NME4O00746 187 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 GLP2RO95838 553 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 FDXRP22570 491 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 CTXN3Q4LDR2 81 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 TEX26Q8N6G2 289 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 TWIST2Q8WVJ9 160 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 PPWD1Q96BP3 646 aaKnown RBP16.8■□□□□ 0.28
PHGDH-223ENST00000641597 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.8■□□□□ 0.28
PHGDH-223ENST00000641597 UTP6Q9NYH9 597 aaKnown RBP16.8■□□□□ 0.28
PHGDH-223ENST00000641597 SUCOQ9UBS9 1254 aaKnown RBP16.8■□□□□ 0.28
PHGDH-223ENST00000641597 CNOT6Q9ULM6 557 aaKnown RBP16.8■□□□□ 0.28
PHGDH-223ENST00000641597 CROCCQ5TZA2 2017 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 CDC7O00311 574 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 TSPAN3O60637 253 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 SNUPNO95149 360 aaKnown RBP16.8■□□□□ 0.28
PHGDH-223ENST00000641597 GFAPP14136 432 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 SLC6A4P31645 630 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 INHBCP55103 352 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 RHDQ02161 417 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 GLB1LQ6UWU2 654 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 COLGALT2Q8IYK4 626 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 ZFAND2BQ8WV99 257 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 VPS33AQ96AX1 596 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 SPON2Q9BUD6 331 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 CROTQ9UKG9 612 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 RAB26Q9ULW5 256 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 USP22Q9UPT9 525 aa16.8■□□□□ 0.28
PHGDH-223ENST00000641597 PDE4DIPQ5VU43 2346 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 IGLV3-10A0A075B6K4 115 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 PDLIM1O00151 329 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 OAZ2O95190 189 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 VNN2O95498 520 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 RPS24P62847 133 aaKnown RBP16.79■□□□□ 0.28
PHGDH-223ENST00000641597 PRKCZQ05513 592 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 IKBKEQ14164 716 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.79■□□□□ 0.286e-6■■■■□ 21.1
PHGDH-223ENST00000641597 ARMC3Q5W041 872 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 UGT3A1Q6NUS8 523 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 SPPL2CQ8IUH8 684 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 ZFP28Q8NHY6 868 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 NCSTNQ92542 709 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 DLG3Q92796 817 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 CCDC126Q96EE4 140 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 BTN2A3PQ96KV6 586 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 HBEGFQ99075 208 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 DDX18Q9NVP1 670 aaKnown RBP16.79■□□□□ 0.28
PHGDH-223ENST00000641597 TMEM181Q9P2C4 612 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 EPS15L1Q9UBC2 864 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms