RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	PCCB	P05166	539 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	KRT7	P08729	469 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	CTSE	P14091	401 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	TIMP2	P16035	220 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	CCKBR	P32239	447 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	CXCR5	P32302	372 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	RWDD2B	P57060	319 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	SLC25A11	Q02978	314 aa	Known RBP	10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	EIF3I	Q13347	325 aa	Known RBP	10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	KRT81	Q14533	505 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	CLCA4	Q14CN2	919 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	POLD3	Q15054	466 aa	Predicted RBP	10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	ELOC	Q15369	112 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	TBR1	Q16650	682 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	COLEC12	Q5KU26	742 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	MANEA	Q5SRI9	462 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	SEL1L2	Q5TEA6	688 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	LRRC38	Q5VT99	294 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	ATG14	Q6ZNE5	492 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	ZNF354C	Q86Y25	554 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	CCNJL	Q8IV13	435 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	PLPP6	Q8IY26	295 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	FSTL5	Q8N475	847 aa	Predicted RBP	10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	ARFGAP1	Q8N6T3	406 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	CENPI	Q92674	756 aa	Predicted RBP	10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	USP7	Q93009	1102 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	FUBP1	Q96AE4	644 aa	Known RBP	10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	HES6	Q96HZ4	224 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	PEBP4	Q96S96	227 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	OSBPL1A	Q9BXW6	950 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	STRADB	Q9C0K7	418 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	NOL6	Q9H6R4	1146 aa	Known RBP	10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	MRPL40	Q9NQ50	206 aa	Known RBP	10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	TMEM248	Q9NWD8	314 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	GPATCH2L	Q9NWQ4	482 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	DDX56	Q9NY93	547 aa	Known RBP	10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	OR12D3	Q9UGF7	316 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	ACSL6	Q9UKU0	697 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	SNX12	Q9UMY4	172 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	PCDHA3	Q9Y5H8	950 aa		10.07	□□□□□ -0.8
PHGDH-222	ENST00000641587	LRRD1	A4D1F6	860 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587		B4DGG1	531 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	C9orf172	C9J069	976 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	CEP104	O60308	925 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	RAMP2	O60895	175 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	RASGRP1	O95267	797 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	ALPI	P09923	528 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	RHOQ	P17081	205 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	TCP1	P17987	556 aa	Known RBP	10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	IL1R2	P27930	398 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	ADRA1B	P35368	520 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	CETN2	P41208	172 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	MAPKAPK2	P49137	400 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	MAPK10	P53779	464 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	SRP54	P61011	504 aa	Known RBP	10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	INPP5A	Q14642	412 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	NFATC4	Q14934	902 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	LRRC14	Q15048	493 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	ATP13A4	Q4VNC1	1196 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	EFHC2	Q5JST6	749 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	CCDC181	Q5TID7	509 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	TXNRD3NB	Q6F5E7	133 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	POLN	Q7Z5Q5	900 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	ZSWIM9	Q86XI8	627 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	PYROXD2	Q8N2H3	581 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	CCDC185	Q8N715	623 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	PLA2G15	Q8NCC3	412 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	GPR156	Q8NFN8	814 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	CCL4L1	Q8NHW4	92 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	UBE2Q2	Q8WVN8	375 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	OR1E3	Q8WZA6	343 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	ALG3	Q92685	438 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	PMEPA1	Q969W9	287 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	RBM41	Q96IZ5	413 aa	Known RBP	10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	CAPZA3	Q96KX2	299 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	GDAP1L1	Q96MZ0	367 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	TMEM74	Q96NL1	305 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	OSBPL9	Q96SU4	736 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	APOO	Q9BUR5	198 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	SNRNP25	Q9BV90	132 aa	Known RBP	10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	C1QTNF7	Q9BXJ2	289 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	DHX35	Q9H5Z1	703 aa	Known RBP	10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	RRAGD	Q9NQL2	400 aa	Predicted RBP	10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	KL	Q9UEF7	1012 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	AP4E1	Q9UPM8	1137 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	SAR1B	Q9Y6B6	198 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	RNF215	Q9Y6U7	377 aa		10.06	□□□□□ -0.8
PHGDH-222	ENST00000641587	TMEM202	A6NGA9	273 aa		10.05	□□□□□ -0.8
PHGDH-222	ENST00000641587	NVL	O15381	856 aa	Known RBP	10.05	□□□□□ -0.8
PHGDH-222	ENST00000641587	KDELR3	O43731	214 aa		10.05	□□□□□ -0.8
PHGDH-222	ENST00000641587	IGSF6	O95976	241 aa		10.05	□□□□□ -0.8
PHGDH-222	ENST00000641587	ITGB2	P05107	769 aa		10.05	□□□□□ -0.8
PHGDH-222	ENST00000641587	RARA	P10276	462 aa		10.05	□□□□□ -0.8
PHGDH-222	ENST00000641587	ETFB	P38117	255 aa		10.05	□□□□□ -0.8
PHGDH-222	ENST00000641587	BLK	P51451	505 aa		10.05	□□□□□ -0.8
PHGDH-222	ENST00000641587	CDH6	P55285	790 aa		10.05	□□□□□ -0.8
PHGDH-222	ENST00000641587	GEMIN4	P57678	1058 aa	Known RBP	10.05	□□□□□ -0.8
PHGDH-222	ENST00000641587	RHOA	P61586	193 aa		10.05	□□□□□ -0.8
PHGDH-222	ENST00000641587	TLE1	Q04724	770 aa		10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 115 ms