RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 NCF1BA6NI72 391 aaPredicted RBP13.75□□□□□ -0.21
SCARB2-227ENST00000640957 TRPC5OSA6NMA1 111 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 NCF1CA8MVU1 366 aaPredicted RBP13.75□□□□□ -0.21
SCARB2-227ENST00000640957 M0QYT0 321 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 TIMM44O43615 452 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 NCF1P14598 390 aaPredicted RBP13.75□□□□□ -0.21
SCARB2-227ENST00000640957 PTPN3P26045 913 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 RPS3AP61247 264 aaKnown RBP13.75□□□□□ -0.21
SCARB2-227ENST00000640957 ATAD3BQ5T9A4 648 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 CATSPER4Q7RTX7 472 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 CNIH3Q8TBE1 160 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 SLC25A23Q9BV35 468 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 ALG2Q9H553 416 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 MOSPD1Q9UJG1 213 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 COL11A2P13942 1736 aaPredicted RBP13.75□□□□□ -0.21
SCARB2-227ENST00000640957 FAM47E-STBD1D6RA91 191 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 SNX2O60749 519 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 LRIG2O94898 1065 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 SPNP16150 400 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 ACADVLP49748 655 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 IFITM2Q01629 132 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 UGT3A2Q3SY77 523 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 NAPEPLDQ6IQ20 393 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 TMC5Q6UXY8 1006 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 ARHGAP36Q6ZRI8 547 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 GALNT5Q7Z7M9 940 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 SFRP1Q8N474 314 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 FBXO30Q8TB52 745 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 ANKRD49Q8WVL7 239 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 DDX28Q9NUL7 540 aaKnown RBP13.75□□□□□ -0.21
SCARB2-227ENST00000640957 VTI1BQ9UEU0 232 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 CRYL1Q9Y2S2 319 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 PCDHGA8Q9Y5G5 932 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 MBL2P11226 248 aaPredicted RBP13.75□□□□□ -0.21
SCARB2-227ENST00000640957 INSRRP14616 1297 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 CD68P34810 354 aaPredicted RBP13.75□□□□□ -0.21
SCARB2-227ENST00000640957 PIGAP37287 484 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 NFYCQ13952 458 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 MXD4Q14582 209 aaPredicted RBP13.75□□□□□ -0.21
SCARB2-227ENST00000640957 RFTN1Q14699 578 aaPredicted RBP13.75□□□□□ -0.21
SCARB2-227ENST00000640957 DPYSL2Q16555 572 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 HFE2Q6ZVN8 426 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 PSTKQ8IV42 348 aaKnown RBP13.75□□□□□ -0.21
SCARB2-227ENST00000640957 NPWQ8N729 165 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 POC5Q8NA72 575 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 SLC22A17Q8WUG5 538 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 GPR78Q96P69 363 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 SLC30A3Q99726 388 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 MYOCQ99972 504 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 FEM1AQ9BSK4 669 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 TRIT1Q9H3H1 467 aaKnown RBP13.75□□□□□ -0.21
SCARB2-227ENST00000640957 PLEKHA5Q9HAU0 1116 aa13.75□□□□□ -0.21
SCARB2-227ENST00000640957 INTS7Q9NVH2 962 aaKnown RBP13.75□□□□□ -0.21
SCARB2-227ENST00000640957 FNDC3AQ9Y2H6 1198 aaKnown RBP13.75□□□□□ -0.21
SCARB2-227ENST00000640957 ANKRD34BA5PLL1 514 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 EIF3FO00303 357 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-227ENST00000640957 ERCC2P18074 760 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 SQLEQ14534 574 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 BCL2A1Q16548 175 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 CCNYL2Q5T2Q4 361 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 METTL7BQ6UX53 244 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 SPARTQ8N0X7 666 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 PELI3Q8N2H9 469 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 FAM86B1Q8N7N1 296 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 ZNF420Q8TAQ5 688 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-227ENST00000640957 BCO2Q9BYV7 579 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 SIK2Q9H0K1 926 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 CACNG4Q9UBN1 327 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 NUP214P35658 2090 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-227ENST00000640957 OR51F1A6NGY5 319 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 A8MT66 165 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 FAM155AB1AL88 458 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-227ENST00000640957 EEF2KO00418 725 aaKnown RBP13.74□□□□□ -0.21
SCARB2-227ENST00000640957 MAFO75444 373 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-227ENST00000640957 LDLRP01130 860 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 PSMB9P28065 219 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 SERPINB1P30740 379 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 SLC1A2P43004 574 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 MCCD1P59942 119 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-227ENST00000640957 EPS8Q12929 822 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 ATP6AP1Q15904 470 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 BROXQ5VW32 411 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 CYHR1Q6ZMK1 362 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 TMEM135Q86UB9 458 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 SYTL1Q8IYJ3 562 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 PPM1MQ96MI6 270 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 ZNF347Q96SE7 839 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 KCTD14Q9BQ13 255 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-227ENST00000640957 TRIM39Q9HCM9 518 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 TXNRD2Q9NNW7 524 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 RNF181Q9P0P0 153 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 SCHIP1Q9P0W5 487 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-227ENST00000640957 NOTOA8MTQ0 251 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 TAF4O00268 1085 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 MSI1O43347 362 aaKnown RBP13.74□□□□□ -0.21
SCARB2-227ENST00000640957 TSPAN3O60637 253 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 ENO2P09104 434 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-227ENST00000640957 SLC6A2P23975 617 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 FMO3P31513 532 aa13.74□□□□□ -0.21
SCARB2-227ENST00000640957 GSK3BP49841 420 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms