RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 RFX6Q8HWS3 928 aa25.17■■□□□ 1.62
VEGFA-232ENST00000640653 LSMEM2Q8N112 164 aa25.17■■□□□ 1.62
VEGFA-232ENST00000640653 TC2NQ8N9U0 490 aa25.17■■□□□ 1.62
VEGFA-232ENST00000640653 FAM46DQ8NEK8 389 aa25.17■■□□□ 1.62
VEGFA-232ENST00000640653 SNIP1Q8TAD8 396 aaKnown RBP25.17■■□□□ 1.62
VEGFA-232ENST00000640653 FGF11Q92914 225 aa25.17■■□□□ 1.62
VEGFA-232ENST00000640653 CARS2Q9HA77 564 aaKnown RBP25.17■■□□□ 1.62
VEGFA-232ENST00000640653 PCDH9Q9HC56 1237 aa25.17■■□□□ 1.62
VEGFA-232ENST00000640653 CAPN8A6NHC0 703 aa25.16■■□□□ 1.62
VEGFA-232ENST00000640653 PPP1R12AO14974 1030 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-232ENST00000640653 TNNT1P13805 278 aa25.16■■□□□ 1.62
VEGFA-232ENST00000640653 NOP2P46087 812 aaKnown RBP25.16■■□□□ 1.62
VEGFA-232ENST00000640653 GPR1P46091 355 aa25.16■■□□□ 1.62
VEGFA-232ENST00000640653 GABREP78334 506 aa25.16■■□□□ 1.62
VEGFA-232ENST00000640653 AP1B1Q10567 949 aa25.16■■□□□ 1.62
VEGFA-232ENST00000640653 SPIDRQ14159 915 aa25.16■■□□□ 1.62
VEGFA-232ENST00000640653 TBC1D25Q3MII6 688 aa25.16■■□□□ 1.62
VEGFA-232ENST00000640653 CCDC74AQ96AQ1 378 aa25.16■■□□□ 1.62
VEGFA-232ENST00000640653 RNF25Q96BH1 459 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-232ENST00000640653 FRMD8Q9BZ67 464 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-232ENST00000640653 SYNDIG1Q9H7V2 258 aa25.16■■□□□ 1.62
VEGFA-232ENST00000640653 POLR1BQ9H9Y6 1135 aa25.16■■□□□ 1.62
VEGFA-232ENST00000640653 MPOP05164 745 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 PYGLP06737 847 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 COMTP21964 271 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 EIF2S3P41091 472 aaKnown RBP25.15■■□□□ 1.62
VEGFA-232ENST00000640653 ABCG1P45844 678 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 LSSP48449 732 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 PTSQ03393 145 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 IHHQ14623 411 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 ZNF765Q7L2R6 523 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 RAVER1Q8IY67 606 aaKnown RBP25.15■■□□□ 1.62
VEGFA-232ENST00000640653 LPCAT1Q8NF37 534 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 GPR156Q8NFN8 814 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 AP2M1Q96CW1 435 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 BRD8Q9H0E9 1235 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 ABCG8Q9H221 673 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 CD84Q9UIB8 345 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 HYOU1Q9Y4L1 999 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 PKD1L2Q7Z442 2459 aa25.15■■□□□ 1.62
VEGFA-232ENST00000640653 PRLP01236 227 aa25.14■■□□□ 1.62
VEGFA-232ENST00000640653 CEACAM5P06731 702 aa25.14■■□□□ 1.62
VEGFA-232ENST00000640653 CD86P42081 329 aa25.14■■□□□ 1.62
VEGFA-232ENST00000640653 STC1P52823 247 aa25.14■■□□□ 1.62
VEGFA-232ENST00000640653 HADHBP55084 474 aaKnown RBP25.14■■□□□ 1.62
VEGFA-232ENST00000640653 ZBTB17Q13105 803 aa25.14■■□□□ 1.62
VEGFA-232ENST00000640653 OGFOD3Q6PK18 319 aa25.14■■□□□ 1.62
VEGFA-232ENST00000640653 NLRP8Q86W28 1048 aa25.14■■□□□ 1.62
VEGFA-232ENST00000640653 CCDC170Q8IYT3 715 aa25.14■■□□□ 1.62
VEGFA-232ENST00000640653 NRSN1Q8IZ57 195 aa25.14■■□□□ 1.62
VEGFA-232ENST00000640653 KIAA1524Q8TCG1 905 aa25.14■■□□□ 1.62
VEGFA-232ENST00000640653 ZNF578Q96N58 590 aaPredicted RBP25.14■■□□□ 1.62
VEGFA-232ENST00000640653 OLFM3Q96PB7 478 aa25.14■■□□□ 1.62
VEGFA-232ENST00000640653 SMIM14Q96QK8 99 aa25.14■■□□□ 1.62
VEGFA-232ENST00000640653 GSDMCQ9BYG8 508 aa25.14■■□□□ 1.62
VEGFA-232ENST00000640653 DPEP2Q9H4A9 486 aa25.14■■□□□ 1.62
VEGFA-232ENST00000640653 LUC7LQ9NQ29 371 aaKnown RBP25.14■■□□□ 1.62
VEGFA-232ENST00000640653 TRNAU1APQ9NX07 287 aaKnown RBP25.14■■□□□ 1.62
VEGFA-232ENST00000640653 ENTPD2Q9Y5L3 495 aa25.14■■□□□ 1.62
VEGFA-232ENST00000640653 ADAMTS20P59510 1910 aa25.14■■□□□ 1.61
VEGFA-232ENST00000640653 APC2O95996 2303 aa25.13■■□□□ 1.61
VEGFA-232ENST00000640653 A0A0U1RQS6 177 aa25.13■■□□□ 1.61
VEGFA-232ENST00000640653 B4DGG1 531 aa25.13■■□□□ 1.61
VEGFA-232ENST00000640653 NTN3O00634 580 aaPredicted RBP25.13■■□□□ 1.61
VEGFA-232ENST00000640653 PSTPIP1O43586 416 aa25.13■■□□□ 1.61
VEGFA-232ENST00000640653 DXOO77932 396 aaKnown RBP25.13■■□□□ 1.61
VEGFA-232ENST00000640653 ILF3Q12906 894 aaKnown RBP eCLIP25.13■■□□□ 1.61
VEGFA-232ENST00000640653 SPA17Q15506 151 aa25.13■■□□□ 1.61
VEGFA-232ENST00000640653 NPNTQ6UXI9 565 aa25.13■■□□□ 1.61
VEGFA-232ENST00000640653 ADAMTSL4Q6UY14 1074 aa25.13■■□□□ 1.61
VEGFA-232ENST00000640653 RFLNAQ6ZTI6 216 aa25.13■■□□□ 1.61
VEGFA-232ENST00000640653 BZW1Q7L1Q6 419 aaKnown RBP25.13■■□□□ 1.61
VEGFA-232ENST00000640653 CCL4L1Q8NHW4 92 aa25.13■■□□□ 1.61
VEGFA-232ENST00000640653 ATXN7L3BQ96GX2 97 aa25.13■■□□□ 1.61
VEGFA-232ENST00000640653 LYSMD1Q96S90 227 aa25.13■■□□□ 1.61
VEGFA-232ENST00000640653 ADGRE3Q9BY15 652 aa25.13■■□□□ 1.61
VEGFA-232ENST00000640653 SUDS3Q9H7L9 328 aaPredicted RBP25.13■■□□□ 1.61
VEGFA-232ENST00000640653 SLC17A4Q9Y2C5 497 aa25.13■■□□□ 1.61
VEGFA-232ENST00000640653 ANKRD11Q6UB99 2663 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-232ENST00000640653 LCA5LO95447 670 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 IVLP07476 585 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 MMP2P08253 660 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 GLB1P16278 677 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 CYLC1P35663 651 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-232ENST00000640653 GNPDA1P46926 289 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 DYNLT1P63172 113 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 SKOR1P84550 965 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 TFDP2Q14188 446 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 C14orf28Q4W4Y0 310 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 MFSD7Q6UXD7 560 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 PDZD3Q86UT5 571 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 CNTD1Q8N815 330 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 GPBAR1Q8TDU6 330 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 GFM1Q96RP9 751 aaKnown RBP25.12■■□□□ 1.61
VEGFA-232ENST00000640653 MLPHQ9BV36 600 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-232ENST00000640653 SEPT10Q9P0V9 454 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 RABGEF1Q9UJ41 708 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 SUFUQ9UMX1 484 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 SATB2Q9UPW6 733 aa25.12■■□□□ 1.61
VEGFA-232ENST00000640653 ACACAQ13085 2346 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms