RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 DGKAP23743 735 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 ADRA1AP35348 466 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 DPTQ07507 201 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 MPP3Q13368 585 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 OLIG2Q13516 323 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 NFATC4Q14934 902 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 SUZ12Q15022 739 aaKnown RBP26.65■■□□□ 1.86
VEGFA-231ENST00000640499 MACC1Q6ZN28 852 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 IPMKQ8NFU5 416 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 RTP4Q96DX8 246 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 LRP4O75096 1905 aa26.65■■□□□ 1.86
VEGFA-231ENST00000640499 GCATO75600 419 aa26.64■■□□□ 1.86
VEGFA-231ENST00000640499 FGGP02679 453 aa26.64■■□□□ 1.86
VEGFA-231ENST00000640499 ITGAVP06756 1048 aa26.64■■□□□ 1.86
VEGFA-231ENST00000640499 SPINT3P49223 89 aa26.64■■□□□ 1.86
VEGFA-231ENST00000640499 THOP1P52888 689 aa26.64■■□□□ 1.86
VEGFA-231ENST00000640499 PTK2BQ14289 1009 aa26.64■■□□□ 1.86
VEGFA-231ENST00000640499 SLC1A5Q15758 541 aa26.64■■□□□ 1.86
VEGFA-231ENST00000640499 ITPRIPL1Q6GPH6 555 aa26.64■■□□□ 1.86
VEGFA-231ENST00000640499 TMC3Q7Z5M5 1100 aa26.64■■□□□ 1.86
VEGFA-231ENST00000640499 RBFAQ8N0V3 343 aa26.64■■□□□ 1.86
VEGFA-231ENST00000640499 SLC25A41Q8N5S1 370 aa26.64■■□□□ 1.86
VEGFA-231ENST00000640499 RHBDD1Q8TEB9 315 aa26.64■■□□□ 1.86
VEGFA-231ENST00000640499 TEX101Q9BY14 249 aa26.64■■□□□ 1.86
VEGFA-231ENST00000640499 SHOC2Q9UQ13 582 aa26.64■■□□□ 1.86
VEGFA-231ENST00000640499 TMEM202A6NGA9 273 aa26.63■■□□□ 1.85
VEGFA-231ENST00000640499 CEP104O60308 925 aa26.63■■□□□ 1.85
VEGFA-231ENST00000640499 ATP1A1P05023 1023 aaKnown RBP26.63■■□□□ 1.85
VEGFA-231ENST00000640499 HOXC4P09017 264 aaPredicted RBP26.63■■□□□ 1.85
VEGFA-231ENST00000640499 CCDC173Q0VFZ6 552 aa26.63■■□□□ 1.85
VEGFA-231ENST00000640499 SNX1Q13596 522 aa26.63■■□□□ 1.85
VEGFA-231ENST00000640499 ALG11Q2TAA5 492 aa26.63■■□□□ 1.85
VEGFA-231ENST00000640499 N4BP2L1Q5TBK1 243 aaPredicted RBP26.63■■□□□ 1.85
VEGFA-231ENST00000640499 RANBP10Q6VN20 620 aa26.63■■□□□ 1.85
VEGFA-231ENST00000640499 NLRP8Q86W28 1048 aa26.63■■□□□ 1.85
VEGFA-231ENST00000640499 FRMD8P1Q9BZ68 369 aaPredicted RBP26.63■■□□□ 1.85
VEGFA-231ENST00000640499 SLC32A1Q9H598 525 aa26.63■■□□□ 1.85
VEGFA-231ENST00000640499 ZNF711Q9Y462 761 aa26.63■■□□□ 1.85
VEGFA-231ENST00000640499 MED19A0JLT2 244 aaPredicted RBP26.62■■□□□ 1.85
VEGFA-231ENST00000640499 ANXA9O76027 345 aa26.62■■□□□ 1.85
VEGFA-231ENST00000640499 STK10O94804 968 aaKnown RBP26.62■■□□□ 1.85
VEGFA-231ENST00000640499 TEAD1P28347 426 aa26.62■■□□□ 1.85
VEGFA-231ENST00000640499 GRK6P43250 576 aa26.62■■□□□ 1.85
VEGFA-231ENST00000640499 GEMP55040 296 aa26.62■■□□□ 1.85
VEGFA-231ENST00000640499 KIAA1024LP59773 190 aa26.62■■□□□ 1.85
VEGFA-231ENST00000640499 MSLNQ13421 630 aaPredicted RBP26.62■■□□□ 1.85
VEGFA-231ENST00000640499 ENPP7Q6UWV6 458 aa26.62■■□□□ 1.85
VEGFA-231ENST00000640499 ZNF765Q7L2R6 523 aa26.62■■□□□ 1.85
VEGFA-231ENST00000640499 PRUNE1Q86TP1 453 aa26.62■■□□□ 1.85
VEGFA-231ENST00000640499 RAVER1Q8IY67 606 aaKnown RBP26.62■■□□□ 1.85
VEGFA-231ENST00000640499 NRSN1Q8IZ57 195 aa26.62■■□□□ 1.85
VEGFA-231ENST00000640499 EID2Q8N6I1 236 aa26.62■■□□□ 1.85
VEGFA-231ENST00000640499 TSACCQ96A04 125 aaPredicted RBP26.62■■□□□ 1.85
VEGFA-231ENST00000640499 AP2M1Q96CW1 435 aa26.62■■□□□ 1.85
VEGFA-231ENST00000640499 FERMT1Q9BQL6 677 aa26.62■■□□□ 1.85
VEGFA-231ENST00000640499 FICDQ9BVA6 458 aa26.62■■□□□ 1.85
VEGFA-231ENST00000640499 RIOK2Q9BVS4 552 aaKnown RBP26.62■■□□□ 1.85
VEGFA-231ENST00000640499 ZFYVE1Q9HBF4 777 aa26.62■■□□□ 1.85
VEGFA-231ENST00000640499 KCTD5Q9NXV2 234 aa26.62■■□□□ 1.85
VEGFA-231ENST00000640499 TRIM38O00635 465 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 FUCA1P04066 466 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 TSHRP16473 764 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 JUNDP17535 347 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 TRIP6Q15654 476 aaKnown RBP26.61■■□□□ 1.85
VEGFA-231ENST00000640499 CCNG2Q16589 344 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 KCTD11Q693B1 232 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 DENND5AQ6IQ26 1287 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 ERMP1Q7Z2K6 904 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 GLRX5Q86SX6 157 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 HEATR4Q86WZ0 1026 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 RASGEF1CQ8N431 466 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 TTC30BQ8N4P2 665 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 GLIS1Q8NBF1 620 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 PTCD2Q8WV60 388 aaKnown RBP26.61■■□□□ 1.85
VEGFA-231ENST00000640499 OR1E3Q8WZA6 343 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 MS4A14Q96JA4 679 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 APOL2Q9BQE5 337 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 FGF22Q9HCT0 170 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 TOR4AQ9NXH8 423 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 CNOT6Q9ULM6 557 aaKnown RBP26.61■■□□□ 1.85
VEGFA-231ENST00000640499 SPEGQ15772 3267 aa26.61■■□□□ 1.85
VEGFA-231ENST00000640499 SCN8AQ9UQD0 1980 aa26.6■■□□□ 1.85
VEGFA-231ENST00000640499 ZNF189O75820 626 aaPredicted RBP26.6■■□□□ 1.85
VEGFA-231ENST00000640499 ETS1P14921 441 aa26.6■■□□□ 1.85
VEGFA-231ENST00000640499 KCNA4P22459 653 aa26.6■■□□□ 1.85
VEGFA-231ENST00000640499 CDK3Q00526 305 aa26.6■■□□□ 1.85
VEGFA-231ENST00000640499 SPARCL1Q14515 664 aa26.6■■□□□ 1.85
VEGFA-231ENST00000640499 PARP6Q2NL67 630 aa26.6■■□□□ 1.85
VEGFA-231ENST00000640499 CCDC70Q6NSX1 233 aa26.6■■□□□ 1.85
VEGFA-231ENST00000640499 DRICH1Q6PGQ1 229 aaPredicted RBP26.6■■□□□ 1.85
VEGFA-231ENST00000640499 PHACTR4Q8IZ21 702 aa26.6■■□□□ 1.85
VEGFA-231ENST00000640499 PRELID2Q8N945 189 aa26.6■■□□□ 1.85
VEGFA-231ENST00000640499 GPR26Q8NDV2 337 aa26.6■■□□□ 1.85
VEGFA-231ENST00000640499 ZNF548Q8NEK5 533 aaPredicted RBP26.6■■□□□ 1.85
VEGFA-231ENST00000640499 COG1Q8WTW3 980 aa26.6■■□□□ 1.85
VEGFA-231ENST00000640499 WDR92Q96MX6 357 aa26.6■■□□□ 1.85
VEGFA-231ENST00000640499 WDR26Q9H7D7 661 aa26.6■■□□□ 1.85
VEGFA-231ENST00000640499 MRPL40Q9NQ50 206 aaKnown RBP26.6■■□□□ 1.85
VEGFA-231ENST00000640499 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.6■■□□□ 1.853e-7■□□□□ 8
VEGFA-231ENST00000640499 COL5A1P20908 1838 aaPredicted RBP26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms