RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 CDK14O94921 469 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 S1PR4O95977 384 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 PLCL1Q15111 1095 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 FAM110CQ1W6H9 321 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 ATAD1Q8NBU5 361 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 OR2T34Q8NGX1 318 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 OR2T3Q8NH03 318 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 UPF1Q92900 1129 aaKnown RBP eCLIP14.59□□□□□ -0.078e-7■■■■■ 26.8
SCARB2-221ENST00000640341 FBXL20Q96IG2 436 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 TMEM74Q96NL1 305 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 ACOX2Q99424 681 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 MRPL40Q9NQ50 206 aaKnown RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 RSL24D1Q9UHA3 163 aaKnown RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 OAZ3Q9UMX2 235 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 USP22Q9UPT9 525 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 NDUFAF1Q9Y375 327 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 DHRS12A0PJE2 317 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 ENPP3O14638 875 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 SCAMP3O14828 347 aaKnown RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 MAGEB3O15480 346 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 OR1E1P30953 314 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 LEPRP48357 1165 aaKnown RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 MLLT6P55198 1093 aaPredicted RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 TBX4P57082 545 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 PURAQ00577 322 aaKnown RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 BRMS1LQ5PSV4 323 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 KDELC1Q6UW63 502 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 LARP4Q71RC2 724 aaKnown RBP eCLIP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 CPNE9Q8IYJ1 553 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 CLYBLQ8N0X4 340 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 NUDT8Q8WV74 236 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 FAF1Q9UNN5 650 aaPredicted RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 TRPV2Q9Y5S1 764 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 BRCA1P38398 1863 aaKnown RBP14.58□□□□□ -0.07
SCARB2-221ENST00000640341 AZIN1O14977 448 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 RHOBTB1O94844 696 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 EEF1DP29692 281 aaKnown RBP14.58□□□□□ -0.08
SCARB2-221ENST00000640341 PRDX3P30048 256 aaKnown RBP14.58□□□□□ -0.08
SCARB2-221ENST00000640341 STT3AP46977 705 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 MAP2K5Q13163 448 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 NFYCQ13952 458 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 ZNF235Q14590 738 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 USP50Q70EL3 339 aaPredicted RBP14.58□□□□□ -0.08
SCARB2-221ENST00000640341 LCA5Q86VQ0 697 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 MIER2Q8N344 545 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 MAGEE2Q8TD90 523 aaPredicted RBP14.58□□□□□ -0.08
SCARB2-221ENST00000640341 RSPH1Q8WYR4 309 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 CCDC68Q9H2F9 335 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 GMIPQ9P107 970 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 RNF112Q9ULX5 631 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 SLC27A5Q9Y2P5 690 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 CCDC162PA2VCL2 907 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 GOLGA8CPA6NN73 597 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 TMX2-CTNND1H3BSU7 103 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 CACNG3O60359 315 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 SEMA3AQ14563 771 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 ZIK1Q3SY52 487 aaPredicted RBP14.58□□□□□ -0.08
SCARB2-221ENST00000640341 C10orf120Q5SQS8 335 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 IRGQQ8WZA9 623 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 IGSF8Q969P0 613 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 UBXN10Q96LJ8 280 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 KATNAL1Q9BW62 490 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 OLAHQ9NV23 265 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 SLAMF8Q9P0V8 285 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 MAP10Q9P2G4 905 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 NOD1Q9Y239 953 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 CEPT1Q9Y6K0 416 aa14.58□□□□□ -0.08
SCARB2-221ENST00000640341 HTTP42858 3142 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 CD3EAPO15446 510 aaKnown RBP14.57□□□□□ -0.08
SCARB2-221ENST00000640341 CLASP2O75122 1294 aaKnown RBP14.57□□□□□ -0.08
SCARB2-221ENST00000640341 ZNF189O75820 626 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-221ENST00000640341 PIM1P11309 404 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-221ENST00000640341 PCNAP12004 261 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 IL10P22301 178 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 PSMA4P25789 261 aaKnown RBP14.57□□□□□ -0.08
SCARB2-221ENST00000640341 OR1G1P47890 313 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 AGTR2P50052 363 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 HERVK_113P63132 956 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 POLD3Q15054 466 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-221ENST00000640341 KIAA0408Q6ZU52 694 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 VPS50Q96JG6 964 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 ZNF597Q96LX8 424 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 CDK15Q96Q40 435 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 RANBP9Q96S59 729 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 ERVK-6Q9BXR3 956 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 RBM38Q9H0Z9 239 aaKnown RBP14.57□□□□□ -0.08
SCARB2-221ENST00000640341 SMOXQ9NWM0 555 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 C8BP07358 591 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 CDK4P11802 303 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 EEF1B2P24534 225 aaKnown RBP14.57□□□□□ -0.08
SCARB2-221ENST00000640341 ZNF135P52742 658 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-221ENST00000640341 PTPRRQ15256 657 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 TSNQ15631 228 aaKnown RBP14.57□□□□□ -0.08
SCARB2-221ENST00000640341 TIGD2Q4W5G0 525 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 TAF2Q6P1X5 1199 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 FAM171BQ6P995 826 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 ZNF549Q6P9A3 640 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 PAQR3Q6TCH7 311 aa14.57□□□□□ -0.08
SCARB2-221ENST00000640341 SLC15A3Q8IY34 581 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms