RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CXCR2P25025 360 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 CDKN2BP42772 138 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 SLC25A52Q3SY17 297 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 KLHL5Q96PQ7 755 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 CSPG4P5Q96PW8 444 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 DUSP16Q9BY84 665 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 PDP1Q9P0J1 537 aaPredicted RBP18.48■□□□□ 0.55
SCARB2-213ENST00000638680 MAP10Q9P2G4 905 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 NDOR1Q9UHB4 597 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 BCKDKO14874 412 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 DHX15O43143 795 aaKnown RBP18.48■□□□□ 0.55
SCARB2-213ENST00000638680 TBL1XO60907 577 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 SLC6A2P23975 617 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 HNF4AP41235 474 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 AQP4P55087 323 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 SIM2Q14190 667 aaPredicted RBP18.48■□□□□ 0.55
SCARB2-213ENST00000638680 C5orf22Q49AR2 442 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 ANXA8L1Q5VT79 327 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 EEF1DP3Q658K8 133 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 TRIM40Q6P9F5 258 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.48■□□□□ 0.55
SCARB2-213ENST00000638680 POP5Q969H6 163 aaKnown RBP18.48■□□□□ 0.55
SCARB2-213ENST00000638680 KCTD15Q96SI1 283 aaPredicted RBP18.48■□□□□ 0.55
SCARB2-213ENST00000638680 RSPH9Q9H1X1 276 aaPredicted RBP18.48■□□□□ 0.55
SCARB2-213ENST00000638680 H3BNX3 289 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 RALGPS1Q5JS13 557 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 LIN54Q6MZP7 749 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 EMID1Q96A84 441 aaPredicted RBP18.48■□□□□ 0.55
SCARB2-213ENST00000638680 EBF3Q9H4W6 596 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 ATP13A3Q9H7F0 1226 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 SQORQ9Y6N5 450 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 CCDC189A1A4V9 331 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 PSIP1O75475 530 aaKnown RBP18.48■□□□□ 0.55
SCARB2-213ENST00000638680 IGFBP5P24593 272 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 CARTPTQ16568 116 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 RNASEH2BQ5TBB1 312 aaKnown RBP18.48■□□□□ 0.55
SCARB2-213ENST00000638680 SLC25A24Q6NUK1 477 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 ZYG11AQ6WRX3 759 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 OTOP3Q7RTS5 596 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 MCUBQ9NWR8 336 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 SMPD3Q9NY59 655 aaPredicted RBP18.48■□□□□ 0.55
SCARB2-213ENST00000638680 WASF2Q9Y6W5 498 aa18.48■□□□□ 0.55
SCARB2-213ENST00000638680 EPHX2P34913 555 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 CTSKP43235 329 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 RTP1P59025 263 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 LENG8Q96PV6 779 aaPredicted RBP18.47■□□□□ 0.55
SCARB2-213ENST00000638680 PNPLA8Q9NP80 782 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 PSME2Q9UL46 239 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 MFSD11O43934 449 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 FGF1P05230 155 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 S100A9P06702 114 aaKnown RBP18.47■□□□□ 0.55
SCARB2-213ENST00000638680 CCNYL3P0C7X3 344 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 BUD31P41223 144 aaPredicted RBP18.47■□□□□ 0.55
SCARB2-213ENST00000638680 HECTD3Q5T447 861 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 FAM151BQ6UXP7 276 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 PIGWQ7Z7B1 504 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.47■□□□□ 0.55
SCARB2-213ENST00000638680 CBR4Q8N4T8 237 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 TWIST2Q8WVJ9 160 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 GLIS2Q9BZE0 524 aaPredicted RBP18.47■□□□□ 0.55
SCARB2-213ENST00000638680 GLOD4Q9HC38 313 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 ZNF180Q9UJW8 692 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 AKR1A1P14550 325 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 FKBP1AP62942 108 aaKnown RBP18.47■□□□□ 0.55
SCARB2-213ENST00000638680 POM121L1PQ3SYA9 428 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 SDHAF4Q5VUM1 108 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 RBM4BQ9BQ04 359 aaKnown RBP18.47■□□□□ 0.55
SCARB2-213ENST00000638680 RBM4Q9BWF3 364 aaKnown RBP18.47■□□□□ 0.55
SCARB2-213ENST00000638680 BRD9Q9H8M2 597 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 EFR3BQ9Y2G0 817 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 CASKO14936 926 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 RGS10O43665 173 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 RPL4P36578 427 aaKnown RBP18.47■□□□□ 0.55
SCARB2-213ENST00000638680 CATSPERGQ6ZRH7 1159 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 PEG10Q86TG7 708 aaKnown RBP18.47■□□□□ 0.55
SCARB2-213ENST00000638680 C12orf50Q8NA57 414 aaPredicted RBP18.47■□□□□ 0.55
SCARB2-213ENST00000638680 ZNF221Q9UK13 617 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 AGO1Q9UL18 857 aaKnown RBP18.47■□□□□ 0.55
SCARB2-213ENST00000638680 HIST1H2ABP04908 130 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 NR2F6P10588 404 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 HIST3H2AQ7L7L0 130 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 PLD5Q8N7P1 536 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 HELQQ8TDG4 1101 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 HIST1H2ACQ93077 130 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 MRPL9Q9BYD2 267 aaKnown RBP18.47■□□□□ 0.55
SCARB2-213ENST00000638680 SSU72Q9NP77 194 aaKnown RBP18.47■□□□□ 0.55
SCARB2-213ENST00000638680 CHRAC1Q9NRG0 131 aa18.47■□□□□ 0.55
SCARB2-213ENST00000638680 LRRIQ1Q96JM4 1722 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 NRCAMQ92823 1304 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 ECDO95905 644 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-213ENST00000638680 MT-ND1P03886 318 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 SLURP2P0DP57 97 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 COL6A2P12110 1019 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 NR4A1P22736 598 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 PRDX6P30041 224 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 STARP49675 285 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 OLR1P78380 273 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 IQSEC1Q6DN90 963 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 CLEC6AQ6EIG7 209 aa18.46■□□□□ 0.55
SCARB2-213ENST00000638680 R3HCC1LQ7Z5L2 792 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms