RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ARHGEF17Q96PE2 2063 aaPredicted RBP21.75■■□□□ 1.07
SCN1B-206ENST00000638536 TMEM202A6NGA9 273 aa21.75■■□□□ 1.07
SCN1B-206ENST00000638536 AURKAO14965 403 aa21.75■■□□□ 1.07
SCN1B-206ENST00000638536 SCAMP1O15126 338 aa21.75■■□□□ 1.07
SCN1B-206ENST00000638536 NDST3O95803 873 aa21.75■■□□□ 1.07
SCN1B-206ENST00000638536 SOD1P00441 154 aa21.75■■□□□ 1.07
SCN1B-206ENST00000638536 NME1P15531 152 aaKnown RBP21.75■■□□□ 1.07
SCN1B-206ENST00000638536 ZNF30P17039 623 aa21.75■■□□□ 1.07
SCN1B-206ENST00000638536 ERMP1Q7Z2K6 904 aa21.75■■□□□ 1.07
SCN1B-206ENST00000638536 IPMKQ8NFU5 416 aa21.75■■□□□ 1.07
SCN1B-206ENST00000638536 TSACCQ96A04 125 aaPredicted RBP21.75■■□□□ 1.07
SCN1B-206ENST00000638536 SPATA13Q96N96 652 aa21.75■■□□□ 1.07
SCN1B-206ENST00000638536 ASXL3Q9C0F0 2248 aa21.75■■□□□ 1.07
SCN1B-206ENST00000638536 GRK6P43250 576 aa21.74■■□□□ 1.07
SCN1B-206ENST00000638536 SIM1P81133 766 aaPredicted RBP21.74■■□□□ 1.07
SCN1B-206ENST00000638536 NFATC4Q14934 902 aa21.74■■□□□ 1.07
SCN1B-206ENST00000638536 KCTD19Q17RG1 926 aaPredicted RBP21.74■■□□□ 1.07
SCN1B-206ENST00000638536 SIRPB2Q5JXA9 342 aa21.74■■□□□ 1.07
SCN1B-206ENST00000638536 ENPP7Q6UWV6 458 aa21.74■■□□□ 1.07
SCN1B-206ENST00000638536 MACC1Q6ZN28 852 aa21.74■■□□□ 1.07
SCN1B-206ENST00000638536 SLC25A41Q8N5S1 370 aa21.74■■□□□ 1.07
SCN1B-206ENST00000638536 UBE2Q2Q8WVN8 375 aa21.74■■□□□ 1.07
SCN1B-206ENST00000638536 MRPL40Q9NQ50 206 aaKnown RBP21.74■■□□□ 1.07
SCN1B-206ENST00000638536 COL5A1P20908 1838 aaPredicted RBP21.73■■□□□ 1.07
SCN1B-206ENST00000638536 CEP295Q9C0D2 2601 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 GOLGA6CA6NDK9 693 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 GOLGA6BA6NDN3 693 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 C5orf60A6NFR6 353 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 YKT6O15498 198 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 LIASO43766 372 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 AGTP01019 485 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 GOLGA6DP0CG33 693 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 JUNDP17535 347 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 PTK2BQ14289 1009 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 TCEA2Q15560 299 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 OASLQ15646 514 aaKnown RBP21.73■■□□□ 1.07
SCN1B-206ENST00000638536 ALG11Q2TAA5 492 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 PRUNE1Q86TP1 453 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 SLC35F6Q8N357 371 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 TOR4AQ9NXH8 423 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 GOLGA6AQ9NYA3 693 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 TRIM38O00635 465 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 TOR1BO14657 336 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 GCATO75600 419 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 METTL18O95568 372 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 MPP3Q13368 585 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 C1orf61Q13536 156 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 SNX1Q13596 522 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 ZNF569Q5MCW4 686 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 RAET1GQ6H3X3 334 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 PHACTR4Q8IZ21 702 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 TAB3Q8N5C8 712 aaPredicted RBP21.73■■□□□ 1.07
SCN1B-206ENST00000638536 PNPLA1Q8N8W4 532 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 PTCD2Q8WV60 388 aaKnown RBP21.73■■□□□ 1.07
SCN1B-206ENST00000638536 AP2M1Q96CW1 435 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 PDXPQ96GD0 296 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 APOL2Q9BQE5 337 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 RIOK2Q9BVS4 552 aaKnown RBP21.73■■□□□ 1.07
SCN1B-206ENST00000638536 MAGEE1Q9HCI5 957 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 FGF22Q9HCT0 170 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 ZNF711Q9Y462 761 aa21.73■■□□□ 1.07
SCN1B-206ENST00000638536 MYLKQ15746 1914 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 AKAP13Q12802 2813 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 FFAR2O15552 330 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 ZSCAN12O43309 604 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 FGGP02679 453 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 SLC4A1P02730 911 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 FUCA1P04066 466 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 CELA2BP08218 269 aaPredicted RBP21.72■■□□□ 1.07
SCN1B-206ENST00000638536 ADRA1AP35348 466 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 SPINT3P49223 89 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 HNRNPKP61978 463 aaKnown RBP eCLIP21.72■■□□□ 1.07
SCN1B-206ENST00000638536 DPTQ07507 201 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 SLC1A5Q15758 541 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 ITPRIPL1Q6GPH6 555 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 RD3Q7Z3Z2 195 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 TMC3Q7Z5M5 1100 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 SLCO6A1Q86UG4 719 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 HEATR4Q86WZ0 1026 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 ZNF548Q8NEK5 533 aaPredicted RBP21.72■■□□□ 1.07
SCN1B-206ENST00000638536 FICDQ9BVA6 458 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 TEX101Q9BY14 249 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 WDR26Q9H7D7 661 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 ZFYVE1Q9HBF4 777 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 KNTC1P50748 2209 aa21.72■■□□□ 1.07
SCN1B-206ENST00000638536 CEP104O60308 925 aa21.71■■□□□ 1.07
SCN1B-206ENST00000638536 TOP3BO95985 862 aaKnown RBP21.71■■□□□ 1.07
SCN1B-206ENST00000638536 EPOP01588 193 aa21.71■■□□□ 1.07
SCN1B-206ENST00000638536 ATP1A1P05023 1023 aaKnown RBP21.71■■□□□ 1.07
SCN1B-206ENST00000638536 PPARDQ03181 441 aa21.71■■□□□ 1.07
SCN1B-206ENST00000638536 SPARCL1Q14515 664 aa21.71■■□□□ 1.07
SCN1B-206ENST00000638536 FAXCQ5TGI0 409 aa21.71■■□□□ 1.07
SCN1B-206ENST00000638536 HID1Q8IV36 788 aa21.71■■□□□ 1.07
SCN1B-206ENST00000638536 OR1E3Q8WZA6 343 aa21.71■■□□□ 1.07
SCN1B-206ENST00000638536 WDR92Q96MX6 357 aa21.71■■□□□ 1.07
SCN1B-206ENST00000638536 FERMT1Q9BQL6 677 aa21.71■■□□□ 1.07
SCN1B-206ENST00000638536 LRRC61Q9BV99 259 aa21.71■■□□□ 1.07
SCN1B-206ENST00000638536 CLPBQ9H078 707 aa21.71■■□□□ 1.07
SCN1B-206ENST00000638536 APOBEC3BQ9UH17 382 aaKnown RBP21.71■■□□□ 1.07
SCN1B-206ENST00000638536 RP1P56715 2156 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms