RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 PCNAP12004 261 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 CD68P34810 354 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-221ENST00000638141 ZNF143P52747 638 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-221ENST00000638141 OR2B6P58173 313 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 SNAP25P60880 206 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 SRP54P61011 504 aaKnown RBP12.01□□□□□ -0.49
CAPN3-221ENST00000638141 B2MP61769 119 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 FOXM1Q08050 763 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 FADDQ13158 208 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 PTPN20Q4JDL3 420 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 ESCO2Q56NI9 601 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 GDPD3Q7L5L3 318 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 STRADAQ7RTN6 431 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 PIGZQ86VD9 579 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 P2RY8Q86VZ1 359 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 XYLT1Q86Y38 959 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 PTRH1Q86Y79 214 aaKnown RBP12.01□□□□□ -0.49
CAPN3-221ENST00000638141 METTL4Q8N3J2 472 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 OR5H6Q8NGV6 325 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 FAR1Q8WVX9 515 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 GLMNQ92990 594 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 NODALQ96S42 347 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 FEM1AQ9BSK4 669 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 CNPY3Q9BT09 278 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 BDH2Q9BUT1 245 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 DGCR6LQ9BY27 220 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 NIF3L1Q9GZT8 377 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 LRRC4Q9HBW1 653 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 AGO4Q9HCK5 861 aaKnown RBP12.01□□□□□ -0.49
CAPN3-221ENST00000638141 SEPT9Q9UHD8 586 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-221ENST00000638141 TCRBV5S2A0A599 114 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 WDR27A2RRH5 827 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 NME4O00746 187 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 TBX1O43435 398 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 SUPT7LO94864 414 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 INMTO95050 263 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 TRIM16O95361 564 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 UGT2B10P36537 528 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 NR2C2P49116 596 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 LIG4P49917 911 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 FOXD4Q12950 439 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-221ENST00000638141 DAG1Q14118 895 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 ANO4Q32M45 955 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 HSDL1Q3SXM5 330 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 AGKQ53H12 422 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 ZBTB41Q5SVQ8 909 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 FAM205BPQ63HN1 556 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 XKRXQ6PP77 449 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 HHIPL2Q6UWX4 724 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 ZBTB33Q86T24 672 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 TMEM151AQ8N4L1 468 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 PQLC3Q8N755 202 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 PIK3R3Q92569 461 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 NXNL1Q96CM4 212 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 ZNF670Q9BS34 389 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 EPS8L2Q9H6S3 715 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 LIN7BQ9HAP6 207 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 KCNH7Q9NS40 1196 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 SLC17A6Q9P2U8 582 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 DNMT3LQ9UJW3 386 aa12.01□□□□□ -0.49
CAPN3-221ENST00000638141 A0A0G2JMP0 313 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 METTL18O95568 372 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 THRBP10828 461 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 IL4RP24394 825 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 OXTRP30559 389 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 GRIA1P42261 906 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 ARSFP54793 590 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 SYT6Q5T7P8 510 aaPredicted RBP12□□□□□ -0.49
CAPN3-221ENST00000638141 BEND5Q7L4P6 421 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 PAGE2Q7Z2X7 111 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 ZNF438Q7Z4V0 828 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 CMC1Q7Z7K0 106 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 SPPL2CQ8IUH8 684 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 CADM2Q8N3J6 435 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 GALNT11Q8NCW6 608 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 MCFD2Q8NI22 146 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 SPPL2BQ8TCT7 592 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 ARNTL2Q8WYA1 636 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 MFSD3Q96ES6 412 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 PPP1R36Q96LQ0 422 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 QKIQ96PU8 341 aaKnown RBP eCLIP12□□□□□ -0.49
CAPN3-221ENST00000638141 TARS2Q9BW92 718 aaKnown RBP12□□□□□ -0.49
CAPN3-221ENST00000638141 NXF2Q9GZY0 626 aaKnown RBP12□□□□□ -0.49
CAPN3-221ENST00000638141 ADNPQ9H2P0 1102 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 SOX17Q9H6I2 414 aaPredicted RBP12□□□□□ -0.49
CAPN3-221ENST00000638141 MEAF6Q9HAF1 191 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 PCSK1NQ9UHG2 260 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 UBIAD1Q9Y5Z9 338 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 ARPC2O15144 300 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 UBDO15205 165 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 CAPN5O15484 640 aaPredicted RBP12□□□□□ -0.49
CAPN3-221ENST00000638141 PLA2G6O60733 806 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 MRPS14O60783 128 aaKnown RBP12□□□□□ -0.49
CAPN3-221ENST00000638141 ALPLP05186 524 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 ITGB5P18084 799 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 CES1P23141 567 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 ETV6P41212 452 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 RAP1GAPP47736 663 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 ACTR2P61160 394 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 INCA1Q0VD86 236 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms