RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 GOLPH3Q9H4A6 298 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 SUDS3Q9H7L9 328 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 PCDH9Q9HC56 1237 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 LUC7LQ9NQ29 371 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 SEPT10Q9P0V9 454 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 CD84Q9UIB8 345 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 TFR2Q9UP52 801 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 PCDHB1Q9Y5F3 818 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 ALG6Q9Y672 507 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 RP1P56715 2156 aa16.73■□□□□ 0.27
CACNA1A-259ENST00000638114 PRSS38A1L453 326 aa16.73■□□□□ 0.27
CACNA1A-259ENST00000638114 PSTPIP1O43586 416 aa16.73■□□□□ 0.27
CACNA1A-259ENST00000638114 CSO75390 466 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-259ENST00000638114 ZNF30P17039 623 aa16.73■□□□□ 0.27
CACNA1A-259ENST00000638114 RFLNAQ6ZTI6 216 aa16.73■□□□□ 0.27
CACNA1A-259ENST00000638114 TECPR1Q7Z6L1 1165 aa16.73■□□□□ 0.27
CACNA1A-259ENST00000638114 TAF8Q7Z7C8 310 aa16.73■□□□□ 0.27
CACNA1A-259ENST00000638114 CNTD1Q8N815 330 aa16.73■□□□□ 0.27
CACNA1A-259ENST00000638114 OLFM3Q96PB7 478 aa16.73■□□□□ 0.27
CACNA1A-259ENST00000638114 PANX2Q96RD6 677 aa16.73■□□□□ 0.27
CACNA1A-259ENST00000638114 TEX101Q9BY14 249 aa16.73■□□□□ 0.27
CACNA1A-259ENST00000638114 TMEM168Q9H0V1 697 aa16.73■□□□□ 0.27
CACNA1A-259ENST00000638114 SYNDIG1Q9H7V2 258 aa16.73■□□□□ 0.27
CACNA1A-259ENST00000638114 DNPEPQ9ULA0 475 aa16.73■□□□□ 0.27
CACNA1A-259ENST00000638114 URB1O60287 2271 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 PRLP01236 227 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 MMP2P08253 660 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 CDKN2BP42772 138 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 GPR1P46091 355 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 RPL26P61254 145 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 SKOR1P84550 965 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 CDK3Q00526 305 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 PTSQ03393 145 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 LLGL1Q15334 1064 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 FAM182AQ5T1J6 154 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 KAZNQ674X7 775 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 B4GALNT4Q76KP1 1039 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 AP2M1Q96CW1 435 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 AGAP3Q96P47 875 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 CCDC3Q9BQI4 270 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 BRD8Q9H0E9 1235 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 ABCG8Q9H221 673 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 CARS2Q9HA77 564 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 RPL26L1Q9UNX3 145 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 ZFHX4Q86UP3 3567 aa16.72■□□□□ 0.27
CACNA1A-259ENST00000638114 FAM208BQ5VWN6 2430 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 A0A0A6YYK5 440 aaPredicted RBP16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 SOWAHDA6NJG2 315 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 USP12O75317 370 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 IPO7O95373 1038 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 CLDN7O95471 211 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 TEAD1P28347 426 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 STC1P52823 247 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 DPTQ07507 201 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 TFDP2Q14188 446 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 DOK6Q6PKX4 331 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 C19orf48Q6RUI8 117 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 SPOCD1Q6ZMY3 1216 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 RBM44Q6ZP01 1051 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 FAM46DQ8NEK8 389 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 CCL4L1Q8NHW4 92 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 SCAMP4Q969E2 229 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 CCDC74AQ96AQ1 378 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 DCBLD2Q96PD2 775 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 FRMD8Q9BZ67 464 aaPredicted RBP16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 RALYQ9UKM9 306 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 GPSM3Q9Y4H4 160 aa16.71■□□□□ 0.27
CACNA1A-259ENST00000638114 ZFYVE26Q68DK2 2539 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 C1orf232A0A0U1RR37 186 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 B4DGG1 531 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 BRINP1O60477 761 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 CST8O60676 142 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 NDUFA10O95299 355 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 CEACAM5P06731 702 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 GNPDA1P46926 289 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 MARCKSL1P49006 195 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 NR2C2P49116 596 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 GALNT3Q14435 633 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 TAZQ16635 292 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 QPCTQ16769 361 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 ISXQ2M1V0 245 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 C11orf63Q6NUN7 778 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 ADAMTSL4Q6UY14 1074 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 BZW1Q7L1Q6 419 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 ZNF765Q7L2R6 523 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 KDELC2Q7Z4H8 507 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 DAAM2Q86T65 1068 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 NT5DC3Q86UY8 548 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 GAS2L3Q86XJ1 694 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 TMTC1Q8IUR5 882 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 CCDC50Q8IVM0 306 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 KATNAL2Q8IYT4 538 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 WDR48Q8TAF3 677 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 HNRNPLLQ8WVV9 542 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 LYSMD1Q96S90 227 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 MLPHQ9BV36 600 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 ADGRE3Q9BY15 652 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 DPEP2Q9H4A9 486 aa16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 SAE1Q9UBE0 346 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-259ENST00000638114 SUFUQ9UMX1 484 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms