RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 KRT10P13645 584 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 CD86P42081 329 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 POLD2P49005 469 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 EPHB1P54762 984 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 SKOR1P84550 965 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 CDK3Q00526 305 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 PTSQ03393 145 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 ADCY2Q08462 1091 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 AP1B1Q10567 949 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 DOK6Q6PKX4 331 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 ARL10Q8N8L6 244 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 CCDC74AQ96AQ1 378 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 OLFM3Q96PB7 478 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 CCDC3Q9BQI4 270 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 TEX101Q9BY14 249 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 NRSN2Q9GZP1 204 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 ABCG8Q9H221 673 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 SEPT10Q9P0V9 454 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 INTUQ9ULD6 942 aa17.7■□□□□ 0.42
PNKP-230ENST00000638016 CACNA1GO43497 2377 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 RCCD1A6NED2 376 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 CAPN8A6NHC0 703 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 SOWAHDA6NJG2 315 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 USP12O75317 370 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 CLDN7O95471 211 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 CEACAM5P06731 702 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 PECAM1P16284 738 aaPredicted RBP17.69■□□□□ 0.42
PNKP-230ENST00000638016 PDX1P52945 283 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 IFI35P80217 286 aaPredicted RBP17.69■□□□□ 0.42
PNKP-230ENST00000638016 GALNT3Q14435 633 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 TCEAL1Q15170 157 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 ISXQ2M1V0 245 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 LRRC38Q5VT99 294 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 KAZNQ674X7 775 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 KDELC2Q7Z4H8 507 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 TAF8Q7Z7C8 310 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 GKN2Q86XP6 184 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 RHOT1Q8IXI2 618 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 CACTIN-AS1Q8N1I8 211 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 ATL2Q8NHH9 583 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 ZNF830Q96NB3 372 aaPredicted RBP17.69■□□□□ 0.42
PNKP-230ENST00000638016 DEPDC7Q96QD5 511 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 FRMD8Q9BZ67 464 aaPredicted RBP17.69■□□□□ 0.42
PNKP-230ENST00000638016 CARS2Q9HA77 564 aaKnown RBP17.69■□□□□ 0.42
PNKP-230ENST00000638016 PCDH9Q9HC56 1237 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 EVA1BQ9NVM1 165 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 PCDHA13Q9Y5I0 950 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 ST14Q9Y5Y6 855 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 UNC13CQ8NB66 2214 aa17.69■□□□□ 0.42
PNKP-230ENST00000638016 ZNF487B1APH4 448 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 B4DGG1 531 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 PSMD11O00231 422 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 NOBOXO60393 691 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 LCA5LO95447 670 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 HOXC4P09017 264 aaPredicted RBP17.68■□□□□ 0.42
PNKP-230ENST00000638016 AK4P27144 223 aaPredicted RBP17.68■□□□□ 0.42
PNKP-230ENST00000638016 ITPKBP27987 946 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 CDKN2BP42772 138 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 SLC1A1P43005 524 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 GNPDA1P46926 289 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 STC1P52823 247 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 QPCTQ16769 361 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 NRROSQ86YC3 692 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 SDR16C5Q8N3Y7 309 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 FAM46DQ8NEK8 389 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 KRT35Q92764 455 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 HAUS1Q96CS2 278 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 AP2M1Q96CW1 435 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 ATXN7L3BQ96GX2 97 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 AGAP3Q96P47 875 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 MAK16Q9BXY0 300 aaKnown RBP17.68■□□□□ 0.42
PNKP-230ENST00000638016 PHPT1Q9NRX4 125 aaPredicted RBP17.68■□□□□ 0.42
PNKP-230ENST00000638016 NCKIPSDQ9NZQ3 722 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 SUFUQ9UMX1 484 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 TMEM98Q9Y2Y6 226 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 PLEKHM1Q9Y4G2 1056 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 PCYT1BQ9Y5K3 369 aaPredicted RBP17.68■□□□□ 0.42
PNKP-230ENST00000638016 ENTPD2Q9Y5L3 495 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 ALG6Q9Y672 507 aa17.68■□□□□ 0.42
PNKP-230ENST00000638016 ITPR1Q14643 2758 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 TNFRSF10CO14798 259 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 INPP4BO15327 924 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 PIRTP0C851 137 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 KELP23276 732 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 GPR1P46091 355 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 RPIAP49247 311 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 GABREP78334 506 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 C3orf38Q5JPI3 329 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 SPOCD1Q6ZMY3 1216 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 B3GNT8Q7Z7M8 397 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 GPR156Q8NFN8 814 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 GLMNQ92990 594 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 NAT6Q93015 286 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 WDR24Q96S15 920 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 RIOK2Q9BVS4 552 aaKnown RBP17.67■□□□□ 0.42
PNKP-230ENST00000638016 SPATS2LQ9NUQ6 558 aaKnown RBP17.67■□□□□ 0.42
PNKP-230ENST00000638016 AMACRQ9UHK6 382 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 REXO2Q9Y3B8 237 aaKnown RBP17.67■□□□□ 0.42
PNKP-230ENST00000638016 PTPRQQ9UMZ3 2332 aa17.67■□□□□ 0.42
PNKP-230ENST00000638016 LOC400499M0QZD8 3231 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms